DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tes and prkl-1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_741435.2 Gene:prkl-1 / 177463 WormBaseID:WBGene00022727 Length:523 Species:Caenorhabditis elegans


Alignment Length:386 Identity:113/386 - (29%)
Similarity:166/386 - (43%) Gaps:98/386 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 PAPVASLAELRGLNPATRAQLQSVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMK 513
            |..::|.....||:||:|.                       |:....|....|.|         
 Worm    18 PQLISSRRAQGGLSPASRI-----------------------RIAADAHRHSTSDD--------- 50

  Fly   514 QVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGE-----LPTSQSSDSGFHSKPPTPGYG 573
                   |....|||    :|.:.:|.      ||::..     ||         .:|.|..|..
 Worm    51 -------DSGCALDE----YAWVPSGL------KPNMVHAYFACLP---------ENKVPFIGSA 89

  Fly   574 SEDLTAGQGRF------ASIPGIEDMNMYPSCAGMPEQFQQLRL----HGDEASGKNSTR----T 624
            .|.....|.|:      :.:...||:|        .|:...||:    ...|..|....:    .
 Worm    90 GEKWRQRQSRYQLPPQDSDVRYCEDLN--------AEEADTLRMFERTRKTECLGSGVVQYAPFD 146

  Fly   625 ILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLK 689
            ..|..|.:.:..||::|.|.|.||.  :||.||:|.||..||.||:||.|..|::|||..|.::|
 Worm   147 TKCEKCPKRLEEGEISVMAARTGKR--YHPSCFRCQTCDVLLVDLIYFAHDNQIYCGRHHAEQVK 209

  Fly   690 IPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAV- 753
             |||..|||:||..|...||..::|..||.|.||::.||.|:|:  :::|.|:||.|:....:. 
 Worm   210 -PRCAKCDEVIFGDECLEAEGRSWHFHHFQCAQCNDVLADQKYM--QRANKPVCLKCFHSSSSTF 271

  Fly   754 RCQRCKVAIGPADQGVAWGDVHWHAS--CFVCAGVQCSKPLIGGRFC-VKENMPFCS-PTC 810
            .|..|:::.......::.||:|||||  ||.|.  .|||.|:|.::. |.|:: ||. .||
 Worm   272 SCTTCRLSFSSDTPHMSQGDLHWHASAECFCCC--VCSKNLLGVKYSRVGESL-FCGYQTC 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 27/56 (48%)
LIM2_Testin_like 691..748 CDD:188727 26/56 (46%)
LIM 755..810 CDD:295319 21/58 (36%)
prkl-1NP_741435.2 PET_Prickle 48..144 CDD:193602 26/138 (19%)
LIM1_Testin_like 149..204 CDD:188726 27/56 (48%)
LIM2_Testin_like 210..262 CDD:188727 24/53 (45%)
LIM 283..324 CDD:295319 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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