DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and pxl-1

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:NP_001021185.2 Gene:pxl-1 / 175831 WormBaseID:WBGene00016197 Length:413 Species:Caenorhabditis elegans


Alignment Length:393 Identity:97/393 - (24%)
Similarity:144/393 - (36%) Gaps:99/393 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   449 PAPVASLAELRGLNPA-TRAQL------------QSVGLDKNMLQSAVSN-----APYYDRLFRS 495
            ||..|.|::|:..... .||.:            ||..|..|:...:|||     :||..   ||
 Worm    13 PALEALLSDLQHTTEVLRRAHISDRRSQSRDDFEQSYDLQGNLNTQSVSNGNITTSPYKR---RS 74

  Fly   496 LHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGEL------P 554
            ...|..|..|       :::::   ::.:|...:               |.:||:..|      |
 Worm    75 SEGKDYSKSQ-------ERIYE---NESRLNPPV---------------YSRPSVQSLLSQVEEP 114

  Fly   555 TSQSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPEQFQQLRLHGDEASGK 619
            ..::|.|.....||:......|:.: .||..|...:...:|..:..|             |.|.|
 Worm   115 PIRASSSRKSLGPPSQAQSYSDVRS-NGRSPSRDPLHSDSMIGTMNG-------------ELSSK 165

  Fly   620 NSTRTIL---CADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCG 681
            :...||.   ||.|.:|| :|:|.:   ..||  .|||..:.|..|...|....:|...|:.||.
 Worm   166 HGVNTIPKGDCAACGKPI-IGQVVI---ALGK--MWHPEHYTCCECGAELGQRPFFERNGRAFCE 224

  Fly   682 RDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLC 746
            .|...:.. |:|:.|...| |....:.....|||:.|.|.:|::|.....:  .||:....|...
 Worm   225 EDYHNQFS-PKCQGCHRAI-TDRCVSVMNKNFHIECFTCAECNQPFGEDGF--HEKNGQTYCKRD 285

  Fly   747 YDRLFAVRCQRCK--------VAIGPADQGVAWGDVHWHASCFVCAGVQCSKPLIGGRFCVKENM 803
            :.||||.:|..|.        .|:|          .|||..||||.  .|.....|..|......
 Worm   286 FFRLFAPKCNGCSQPITSNFITALG----------THWHPDCFVCQ--HCGVSFNGASFFEHNGA 338

  Fly   804 PFC 806
            |.|
 Worm   339 PLC 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 19/56 (34%)
LIM2_Testin_like 691..748 CDD:188727 15/56 (27%)
LIM 755..810 CDD:295319 16/60 (27%)
pxl-1NP_001021185.2 LIM1_Leupaxin 174..228 CDD:188790 20/59 (34%)
LIM 235..290 CDD:278823 15/57 (26%)
LIM3_Paxillin_like 294..346 CDD:188724 16/60 (27%)
LIM4_Paxillin_like 353..404 CDD:188725
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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