DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and PRICKLE2

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_011531734.1 Gene:PRICKLE2 / 166336 HGNCID:20340 Length:966 Species:Homo sapiens


Alignment Length:794 Identity:145/794 - (18%)
Similarity:190/794 - (23%) Gaps:475/794 - (59%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GAPCAECKDKCPGLDLHFWRKVCRNCKCPKIQH---VCP------------------DDDDATGW 84
            |.||..|.|:|||..||.|||:|.:||||:.:|   |.|                  ..||.:|.
Human    60 GQPCNACGDQCPGFALHKWRKICLHCKCPQEEHMVTVMPLEMEKTISKLMFDFQRNSTSDDDSGC 124

  Fly    85 AQFEILGQIRAKPAYIKIKALASQPVQLEWVPPNAAPDVVTDYMEKLGTAQIPVAGSDAALKRKM 149
            |..|                       ..||||...|:.|..|...|...::|...|.....|..
Human   125 ALEE-----------------------YAWVPPGLKPEQVHQYYSCLPEEKVPYVNSPGEKLRIK 166

  Fly   150 QLELQVPPHDLDAALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRLGDRLNHAQVEHVAPALMP 214
            ||..|:||||.:...|:.|.|.|..:|:.:..:.:.:.:|:|.|                     
Human   167 QLLHQLPPHDNEVRYCNSLDEEEKRELKLFSSQRKRENLGRGNV--------------------- 210

  Fly   215 TQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVAFSEPLCESTAQFEENGAL 279
                                                                             
Human   211 ----------------------------------------------------------------- 210

  Fly   280 RAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLGPIAEFRKEYVNNPQFRAE 344
                                                                             
Human   211 ----------------------------------------------------------------- 210

  Fly   345 INTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRRVKFGGVSTIVYDCGLPAN 409
                              .||        ||.: .||                            
Human   211 ------------------RPF--------PVTM-TGA---------------------------- 220

  Fly   410 TDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLNPATRAQLQSVGL 474
                                                                             
Human   221 ----------------------------------------------------------------- 220

  Fly   475 DKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFADMANG 539
                                                                             
Human   221 ----------------------------------------------------------------- 220

  Fly   540 CKDISYPKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCAGMPE 604
                                                                             
Human   221 ----------------------------------------------------------------- 220

  Fly   605 QFQQLRLHGDEASGKNSTRTILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADL 669
                                 :|..|...|..|::||.|.|||..:.|||.||.|..|.|||.||
Human   221 ---------------------ICEQCGGQINGGDIAVFASRAGHGVCWHPPCFVCTVCNELLVDL 264

  Fly   670 VYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIA 734
            :||:..|:::|||..|..|| |||.||||:||..|.|.||...:|:|||||::|:..|.||:||.
Human   265 IYFYQDGKIYCGRHHAECLK-PRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGGQRYIM 328

  Fly   735 DEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHA--SCFVCAGVQCSKPLIGGR 796
              |...|.|..|::.|:|..|..|...|| .||| :.:...||||  :||.||  .|.|.|:|..
Human   329 --KEGRPYCCHCFESLYAEYCDTCAQHIG-IDQGQMTYDGQHWHATETCFCCA--HCKKSLLGRP 388

  Fly   797 FCVKENMPFCSPTC 810
            |..|:...|||..|
Human   389 FLPKQGQIFCSRAC 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 26/86 (30%)
LIM1_Testin_like 627..684 CDD:188726 28/56 (50%)
LIM2_Testin_like 691..748 CDD:188727 29/56 (52%)
LIM 755..810 CDD:295319 24/57 (42%)
PRICKLE2XP_011531734.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 49 1.000 Domainoid score I11790
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
65.820

Return to query results.
Submit another query.