DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and Zyx

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_006236450.1 Gene:Zyx / 114636 RGDID:620698 Length:666 Species:Rattus norvegicus


Alignment Length:642 Identity:126/642 - (19%)
Similarity:196/642 - (30%) Gaps:201/642 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   349 CPQPPMTPIKSP-PGTPFN------SPLPLKNPVQIRMGAQMRQ-DTPMRRVKFGGVSTIVYDCG 405
            ||..|..|:.:| ||....      ||.|...|:::......|. ..|.|||:..|...::.|..
  Rat    28 CPALPPRPLPAPSPGRSLYGLGAALSPPPPSLPLRVVPPRLARSCSGPGRRVRGLGAEAVIRDAA 92

  Fly   406 L-----------------------PANTDYDRDPVFAQILQAEPLKHAF-------------QEA 434
            |                       .|...|.....||.::..:|..:.|             |.|
  Rat    93 LTLLPAPGLTMAAPRPPPAISVSVSAPAFYAPQKKFAPVVAPKPKVNPFRPGDSESPVAAGAQRA 157

  Fly   435 RAGRA-------------PSSVVISN---------------------------------IPAPVA 453
            :.||.             |...||..                                 .|:|..
  Rat   158 QMGRVGEIPPPPPEDFPLPPPPVIGEGDDSEGALGGAFPPPPPPLIEEPFPPAPLEEDIFPSPPP 222

  Fly   454 SLAELRG------LNPATRAQLQSVGLD----KNMLQSAVSNAPYYDRLFR-------------- 494
            .|.|..|      |.|..|.::.|:.|:    .::|.....|.|:..|:..              
  Rat   223 PLEEEGGPEAPTQLPPQPREKVSSIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPFVPK 287

  Fly   495 ----------------------------------SLH----------DKGISHDQCHLLQPMKQV 515
                                              .||          .:.:|........|:.|.
  Rat   288 PSTKPAPVGTAPLPPWKAPSSSQPPPQPQAKPQVQLHAQPQAKPHVQPQSVSSANTQPRGPLSQA 352

  Fly   516 HDWLLDDDQLLDEIDKVFADMANGCKDISYPKPSLGELPTSQSSDSGFHS-KPPTPGYG--SEDL 577
            .........:..:...|.:..:.|......|:||...:|....|..|..| :||:..|.  .|..
  Rat   353 PTPAPKFAPVAPKFTPVASKFSPGAPSGPGPQPSQKSVPLEAPSSVGTGSPQPPSFTYAQQKEKP 417

  Fly   578 TAGQGRFASIPGIEDMNMYPSCAG-----------MPEQFQQLRLHGDEASGKNSTRTILCADCN 631
            ...:.:....|..::.|...|..|           :.:..|||....:....::......|..|:
  Rat   418 LVQEKQHPLPPPAQNQNQVRSPGGPGPLTLKEVEELEQLTQQLMQDMEHPQRQSVAVNESCGKCS 482

  Fly   632 QPIAMGEVAVKADRAGKEIAWHPGCFKCITCRELLADLVYFFHQGQVFCGRDLAIRLKIPRCRAC 696
            ||:|..:.||:|  .|:  .:|..||.|..|::.|....::..:|..:|.......|:  :|..|
  Rat   483 QPLARAQPAVRA--LGQ--LFHITCFTCHQCQQQLQGQQFYSLEGAPYCEGCYTDTLE--KCNTC 541

  Fly   697 DELIFTKEYTAAEEATFHIKHFCCYQCDEPLAGQQYIADEKSNMPLCLLCYDRLFAVRCQRCKVA 761
            .:.|..:...|..:| :|...|.|..|..||.|..:|.|: :|.|.|:..|.:.:|.||..|...
  Rat   542 GQPITDRMLRATGKA-YHPHCFTCVVCACPLEGTSFIVDQ-ANQPHCVPDYHKQYAPRCSVCSEP 604

  Fly   762 IGPADQG------VAWGDVHWHASCFVCAGVQCSK------------PLIGGRFCVK 800
            |.| :.|      |...|.::|..|:.|.  .|.|            ||.|...|.|
  Rat   605 IMP-EPGRDETVRVVALDKNFHMKCYKCE--DCGKALSIEADDNGCFPLDGHVLCRK 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604
LIM1_Testin_like 627..684 CDD:188726 17/56 (30%)
LIM2_Testin_like 691..748 CDD:188727 17/56 (30%)
LIM 755..810 CDD:295319 17/64 (27%)
ZyxXP_006236450.1 LIM1_Zyxin 445..531 CDD:188735 20/89 (22%)
LIM2_Zyxin 538..597 CDD:188739 19/60 (32%)
LIM3_Zyxin 598..664 CDD:188819 17/64 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1704
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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