DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tes and prickle2

DIOPT Version :9

Sequence 1:NP_611215.1 Gene:Tes / 36965 FlyBaseID:FBgn0034223 Length:816 Species:Drosophila melanogaster
Sequence 2:XP_031757102.1 Gene:prickle2 / 100126208 XenbaseID:XB-GENE-482891 Length:893 Species:Xenopus tropicalis


Alignment Length:799 Identity:149/799 - (18%)
Similarity:191/799 - (23%) Gaps:477/799 - (59%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 EAGAGAPCAECKDKCPGLDLHFWRKVCRNCKCPKIQHVC---------------------PDDDD 80
            |...|.||..|.|:||||.||.|||:|.:||||:.:|..                     ...||
 Frog    20 EPERGQPCNACGDQCPGLALHRWRKICLHCKCPREEHSATAMPLEMEKTMNKLMFDFQRNSTSDD 84

  Fly    81 ATGWAQFEILGQIRAKPAYIKIKALASQPVQLEWVPPNAAPDVVTDYMEKLGTAQIPVAGSDAAL 145
            .:|.|..|                       ..|:||...|:.|..|...|...::|...|....
 Frog    85 DSGCALEE-----------------------YAWIPPGLKPEQVHQYYSCLPDDKVPYVNSPGEK 126

  Fly   146 KRKMQLELQVPPHDLDAALCDGLTETEAIQLQQYVQKLREQCVGQGVVVRLGDRLNHAQVEHVAP 210
            .|..||..|:||||.:...|:.|.|.|..:|                                  
 Frog   127 SRIKQLLHQLPPHDNEVRYCNSLDEEEKREL---------------------------------- 157

  Fly   211 ALMPTQEAQQTWQSLGLMPVADDTLNELLANPKVAQALASPASAHPKLLVAFSEPLCESTAQFEE 275
                                      :|.:|                                  
 Frog   158 --------------------------KLFSN---------------------------------- 162

  Fly   276 NGALRAQTREKLLGISKPALLSLVTHGIVYDKVLGILQEKKLNISRDPKLGPIAEFRKEYVNNPQ 340
                                                 |.|:.|:.|                   
 Frog   163 -------------------------------------QRKRENLGR------------------- 171

  Fly   341 FRAEINTICPQPPMTPIKSPPGTPFNSPLPLKNPVQIRMGAQMRQDTPMRRVKFGGVSTIVYDCG 405
                                                                  |.|.       
 Frog   172 ------------------------------------------------------GNVR------- 175

  Fly   406 LPANTDYDRDPVFAQILQAEPLKHAFQEARAGRAPSSVVISNIPAPVASLAELRGLNPATRAQLQ 470
                                                       |.||                  
 Frog   176 -------------------------------------------PFPV------------------ 179

  Fly   471 SVGLDKNMLQSAVSNAPYYDRLFRSLHDKGISHDQCHLLQPMKQVHDWLLDDDQLLDEIDKVFAD 535
                                                                             
 Frog   180 ----------------------------------------------------------------- 179

  Fly   536 MANGCKDISYPKPSLGELPTSQSSDSGFHSKPPTPGYGSEDLTAGQGRFASIPGIEDMNMYPSCA 600
                                                                             
 Frog   180 ----------------------------------------------------------------- 179

  Fly   601 GMPEQFQQLRLHGDEASGKNSTRT-ILCADCNQPIAMGEVAVKADRAGKEIAWHPGCFKCITCRE 664
                                 |.| .:|..|...|..|::||.|.|||..:.|||.||.||.|.|
 Frog   180 ---------------------TMTGAICEQCGGQINGGDMAVFASRAGHGVCWHPQCFVCIICNE 223

  Fly   665 LLADLVYFFHQGQVFCGRDLAIRLKIPRCRACDELIFTKEYTAAEEATFHIKHFCCYQCDEPLAG 729
            ||.||:||:..|:::|||..|..|| |||.||||:||..|.|.||...:|:|||||::|:..|.|
 Frog   224 LLVDLIYFYQDGKIYCGRHHAECLK-PRCAACDEIIFADECTEAEGRHWHMKHFCCFECETVLGG 287

  Fly   730 QQYIADEKSNMPLCLLCYDRLFAVRCQRCKVAIGPADQG-VAWGDVHWHA--SCFVCAGVQCSKP 791
            |:||.  |...|.|..|::.|:|..|..|...|| .||| :.:...||||  :||.||  .|.|.
 Frog   288 QRYIM--KEGRPYCCNCFESLYAEYCDTCAQHIG-IDQGQMTYDGQHWHATENCFCCA--HCKKS 347

  Fly   792 LIGGRFCVKENMPFCSPTC 810
            |:|..|..|:...|||..|
 Frog   348 LLGRPFLPKQGQIFCSRAC 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TesNP_611215.1 PET_testin 110..197 CDD:193604 22/86 (26%)
LIM1_Testin_like 627..684 CDD:188726 29/56 (52%)
LIM2_Testin_like 691..748 CDD:188727 29/56 (52%)
LIM 755..810 CDD:295319 24/57 (42%)
prickle2XP_031757102.1 PET_Prickle 82..178 CDD:193602 36/372 (10%)
LIM1_Prickle 186..244 CDD:188799 29/57 (51%)
LIM2_Prickle 249..304 CDD:188802 29/56 (52%)
LIM3_Prickle 309..367 CDD:188804 25/61 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11469
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D422310at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X39
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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