DRSC/TRiP Functional Genomics Resources

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Protein Alignment robl and robl37BC

DIOPT Version :9

Sequence 1:NP_523771.1 Gene:robl / 36963 FlyBaseID:FBgn0024196 Length:97 Species:Drosophila melanogaster
Sequence 2:NP_609931.1 Gene:robl37BC / 35166 FlyBaseID:FBgn0028569 Length:115 Species:Drosophila melanogaster


Alignment Length:93 Identity:31/93 - (33%)
Similarity:57/93 - (61%) Gaps:0/93 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SQEVEETLKRIQSHKGVVGTIVVNNEGIPVKSTLDNTTTVQYAGLMSQLADKARSVVRDLDPSND 66
            |..|:.|..|:....||.|.|:::..|:||::.|.......||..|..|...|||:|:||:..::
  Fly     3 SNTVQMTFDRLVQLPGVTGAILIDGNGVPVRTNLPANVARIYADRMRPLVILARSMVQDLENGDE 67

  Fly    67 MTFLRVRSKKHEIMVAPDKDFILIVIQN 94
            ::::|:|:::.|.|||.:.:..:|:||:
  Fly    68 LSYVRLRTRRQETMVATENEHTIILIQD 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
roblNP_523771.1 Robl_LC7 4..94 CDD:397386 29/89 (33%)
robl37BCNP_609931.1 Robl_LC7 7..95 CDD:281277 28/87 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4115
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S2020
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR10779
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.860

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