DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl3 and adgrl2a

DIOPT Version :10

Sequence 1:NP_663308.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_073772399.1 Gene:adgrl2a / 57987 ZFINID:ZDB-GENE-000607-49 Length:1500 Species:Danio rerio


Alignment Length:278 Identity:65/278 - (23%)
Similarity:113/278 - (40%) Gaps:56/278 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   217 VAIVISLICIILTISVYLYVEKLRN----LH-GKCFICYLASLFLGYFFLVLNVWKYSSGFCVTA 276
            |.||:||||:.::|..:.:...|::    :| ..|...::|.|.   |.:.:::.:......:.|
Zfish   864 VGIVVSLICLAMSIFTFCFFRGLQSDRNTIHKNLCINLFIAELI---FLIGIDMTEPKLACSIIA 925

  Fly   277 GFLGYFSVIAAFFWLSV----ISLTLWNSFSGNSSWLNRFLPQNRFLSYNLYAWGMALLLTAITY 337
            |.|.|| .:|:|.|:.:    :.|.|...|...             .|...|.:....||.|:..
Zfish   926 GILHYF-FLASFAWMCLEGVQLYLMLVEVFESE-------------YSRRKYFYMAGYLLPAVVV 976

  Fly   338 IADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFYGPMLLIIVFNITMFVLTAFRIMKVKKEAQN 402
            .....|....    .|..|.||:.. |...:..|.||:..||:.|:...::|.:::||      :
Zfish   977 GVSAAVDFRS----YGTKKACWLRM-DNHFIWSFIGPVTFIIMLNLIFLLITMYKMMK------H 1030

  Fly   403 FTQQQKTTNRLN----SDKQTYALFLR--------LFIIMGLSWSLEIISFLLSKNQAWAKAFMV 455
            .|..:..::||.    .|.:.   |::        |..::||:||..:. |:...:...|..|.:
Zfish  1031 STSLKPDSSRLEHINYEDNKP---FIKSWVMGGFALLCLLGLTWSFGLF-FISESSVVLAYLFTI 1091

  Fly   456 ADYFNWSQGTVIFLLFVL 473
               ||..||..||....|
Zfish  1092 ---FNTFQGMFIFTFHCL 1106

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_663308.1 Methuselah_N 26..204 CDD:429053
7tmB3_Methuselah-like 208..486 CDD:410632 65/278 (23%)
TM helix 1 210..235 CDD:410632 8/17 (47%)
TM helix 2 244..266 CDD:410632 4/21 (19%)
TM helix 3 274..301 CDD:410632 10/30 (33%)
TM helix 4 318..338 CDD:410632 5/19 (26%)
TM helix 5 364..393 CDD:410632 8/28 (29%)
TM helix 6 415..442 CDD:410632 7/34 (21%)
TM helix 7 450..475 CDD:410632 9/24 (38%)
adgrl2aXP_073772399.1 None
Blue background indicates that the domain is not in the aligned region.

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