DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl3 and Adgrf2

DIOPT Version :9

Sequence 1:NP_001286526.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_017173054.1 Gene:Adgrf2 / 435529 MGIID:2182728 Length:673 Species:Mus musculus


Alignment Length:448 Identity:101/448 - (22%)
Similarity:179/448 - (39%) Gaps:99/448 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 MSEDELNKHDPFVNV------TLSDGSVVRRHFKEDLIVQSDLAKPGCPRMYFLNHELPGNEFTL 165
            :|.:||.|......|      ||  |:::.....|::.|.      |......|..||. |...:
Mouse   260 LSPEELQKVPSAFQVISIAFPTL--GAILEASLLENVTVN------GLVLSVILPEELK-NISLI 315

  Fly   166 FEN--------------GSLLRHWD-----KVELSKRE---YCVQHLSFKDDSIRIAPHF--CPL 206
            ||.              .||...||     .::.:.|:   .|..:..:...||.::|:.  .|:
Mouse   316 FEKIRKSGERKSQCVGWHSLESRWDWRACKTIQENSRQAVCRCRPNKLYTSFSILMSPNTLESPV 380

  Fly   207 SSEHSRTWKTVAIVISLICIILTISVYLYVEK-----LRNLHGKCFICYLASLFLGYFFLVLNVW 266
            .:..:.....::|...:||:.:.:.|:..|.|     ||:|   |.....|:|      |:.:.|
Mouse   381 LTYITYIGLGISICSLIICLAIEVLVWSQVTKTEISYLRHL---CIANIAATL------LMADAW 436

  Fly   267 KYSSGF----------CVTAGFLGYFSVIAAFFWLSVISLTLWNSFSGNSSWLNRF--LPQNRFL 319
            ...:.|          ||.|.|..:|..::.|||:...:|.:....      |..|  ||::..:
Mouse   437 FIVASFLSGPVLHHNGCVAATFFVHFFYLSVFFWMLAKALLILYGI------LIVFHTLPKSCLV 495

  Fly   320 SYNLYA--WGMALLLTAITYIADQVVKNEKLRPRVGVGKNCWIYTGDMT-VMIYFYGPMLLIIVF 381
            : :|::  :|..|::..||....:..|. .|||..     ||: ..||| .::.|..|.|.|:|.
Mouse   496 A-SLFSVGYGCPLVIAIITLAVTEPGKG-YLRPEA-----CWL-NWDMTKALLAFVVPALAIVVV 552

  Fly   382 NITMFVLTAFRIMKVKKEA--QNFTQQQKTTNRLNSDKQTYALFLRLFIIMGLSWSLEIISFLLS 444
            |:   :.....|:|.::.|  .:..|:.:...|:..:      ...|..::||:|...|.:.:..
Mouse   553 NL---ITVTMVIIKTQRAAIGSSMFQEVRAIVRICKN------IAILTPLLGLTWGFGIATVING 608

  Fly   445 KNQAWAKAFMVADYFNWSQGTVIFLLF--VLRPSTLKLLKERIKGGRDEAGASDEHIS 500
            .:.|:   .::....|..||..| |||  :|.|...:.||.||...:..:..|::..|
Mouse   609 HSLAF---HIIFSLLNALQGFFI-LLFGTILDPKIREALKSRITSAKWISRVSEDFSS 662

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_001286526.1 Methuselah_N 26..204 CDD:284145 26/126 (21%)
7tm_4 216..436 CDD:304433 57/241 (24%)
Adgrf2XP_017173054.1 GPS 326..373 CDD:383024 8/46 (17%)
7tmB2_GPR111_115 378..644 CDD:320660 69/301 (23%)
TM helix 1 381..405 CDD:320660 3/23 (13%)
TM helix 2 420..441 CDD:320660 6/29 (21%)
TM helix 3 454..476 CDD:320660 7/21 (33%)
TM helix 4 497..513 CDD:320660 3/15 (20%)
TM helix 5 535..558 CDD:320660 8/25 (32%)
TM helix 6 581..606 CDD:320660 6/30 (20%)
TM helix 7 611..636 CDD:320660 8/28 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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