DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl3 and adgrv1

DIOPT Version :9

Sequence 1:NP_001286526.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_009300028.1 Gene:adgrv1 / 415105 ZFINID:ZDB-GENE-040624-6 Length:6208 Species:Danio rerio


Alignment Length:356 Identity:67/356 - (18%)
Similarity:122/356 - (34%) Gaps:97/356 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   170 SLLRHWDKVE---LSKREYCVQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISL-------- 223
            ||...|::..   ||..::|    ...||:    .::...:..|...:...|.:.||        
Zfish  5758 SLCLLWNQAAESWLSDGQFC----RLVDDT----QNYVECACSHLSIYTAYAEIESLASFNEAFY 5814

  Fly   224 ----ICI----------ILTISVYLYVEK-LRNLHGKCF---ICYLASLFLGYFFLVLNVWKYSS 270
                |||          ::.....::..| |.::...|.   ||:|.|.|.|..|        |.
Zfish  5815 AAGFICISGFALAMVSHLMCARFLMFAAKLLTHMMVACLGTQICFLVSAFRGRMF--------SE 5871

  Fly   271 GFCVTAGFLGYFSVIAAFFWLSVISLTLWNSFSGNSSWLNRFLPQNRFLSYNLYAWGMALLLTAI 335
            ..|...|...::..::.|.|:.|.::..|.....|.....|     |:|.|.|.:||:..|:..:
Zfish  5872 DSCAALGLFFHYFHLSQFSWMLVQAINFWQILVMNDEHTER-----RYLLYFLLSWGLPALVIIV 5931

  Fly   336 TYIADQVVKNEKLRPRVGVGKNCW-------IYTGDMTVMIYFYGPML------LIIVFNITMFV 387
            ..:             |.:|...|       :..||:..:...|..:.      ||.:..:.:..
Zfish  5932 LVV-------------VLLGGFGWSIHSVYGLVQGDLCFIPNVYAALCTAALVPLICLVGVLVIF 5983

  Fly   388 LTAFRIMKVKKEAQNFTQQQKT-----TNRLNSDKQTYALFLRLFIIMGLSWSLEIISFLLSKNQ 447
            :.|:::          |||.|.     ..|.||.:....|:|...:.:...|:    ...::...
Zfish  5984 IHAYQV----------TQQWKAYDDIYRGRTNSSEVPMMLYLFALVTLVCVWA----GLHMAYRY 6034

  Fly   448 AWAKAFMVADYFNWSQGTVIFLLFVLRPSTL 478
            .|....:|  .||...|..:|.::.:..:.|
Zfish  6035 IWMLILLV--IFNIFLGLYVFSVYFVMHNQL 6063

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_001286526.1 Methuselah_N 26..204 CDD:284145 8/36 (22%)
7tm_4 216..436 CDD:304433 51/263 (19%)
adgrv1XP_009300028.1 Calx-beta 138..230 CDD:295344
Calx-beta 256..355 CDD:295344
Calx-beta 766..853 CDD:295344
Calx-beta 880..971 CDD:295344
Calx-beta 996..1082 CDD:295344
Laminin_G_3 1343..1484 CDD:290121
Calx-beta 1576..1654 CDD:295344
Calx-beta 1712..1794 CDD:295344
Calx-beta 1849..1939 CDD:295344
Calx-beta 1975..2065 CDD:295344
Calx-beta 2105..2193 CDD:295344
Calx-beta 2220..2310 CDD:295344
Calx-beta 2590..2656 CDD:295344
Calx-beta 2951..3039 CDD:295344
Calx-beta <3574..3614 CDD:295344
Calx-beta 3641..3729 CDD:295344
Calx-beta <3788..3864 CDD:295344
Calx-beta 4021..4112 CDD:295344
Calx-beta 4257..4345 CDD:295344
Calx-beta 4390..4480 CDD:295344
Calx-beta 5003..5085 CDD:295344
7tm_4 <5871..>5926 CDD:304433 14/59 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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