DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl3 and mthl1

DIOPT Version :10

Sequence 1:NP_663308.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_573140.1 Gene:mthl1 / 32637 FlyBaseID:FBgn0030766 Length:676 Species:Drosophila melanogaster


Alignment Length:538 Identity:123/538 - (22%)
Similarity:218/538 - (40%) Gaps:130/538 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LLLLQNSNAEIPGCDFFDTVDI-----SKAPRFSNGS-YLYEGLLI--PAHLTAEYDYKLLA-DD 68
            |..|.|:.   |.|....|.:|     :....|.||: |:.|..|:  |:....:::..::. :|
  Fly   105 LKFLPNTR---PTCRKDQTTEIFRSRGANVMLFPNGTLYVRERALMVQPSDYCVDWEVAVVCLND 166

  Fly    69 SKEKVASHVRGCACHLRPCIRFCCPQYQKMQKSKCYG------------DMSEDELNKHDPFVNV 121
            |:...|......|.:  |.::...|: ..::.|||.|            |:..:.....|..:.:
  Fly   167 SQPINALEDPDYAAN--PLVQQEPPK-ASLRLSKCCGKWGSYNTQLQNCDLQPNHQAAVDGLLRL 228

  Fly   122 T--LSDGSVVRRHFKEDLIVQSDLAKPGCPRMYFLNHELPG--------NEFTLFENGSLLRHWD 176
            :  |.:||           .|:....|.|.:        ||        .:..|..|.::|:...
  Fly   229 SPQLPEGS-----------YQTSYGLPDCGQ--------PGGYSIAGDWQDAKLDRNTAMLQLPH 274

  Fly   177 KVELSKREYCVQHLSFKDDSIRIAPHFCPLSSEH---------------------------SRTW 214
            | .||..:||::|.. ::..::|      ::.:|                           .:..
  Fly   275 K-NLSAGQYCLEHTQ-REGEVKI------IACQHLFSSAAGAGIHDGSIGGTIEQANGQNLQKAV 331

  Fly   215 KTVAIVISLICIILT-ISVYLYVEKLRNLHGKCFICYLASLFLGYFFLVLNVWKYS----SGFCV 274
            .|..|::|::.:..| ::.:|.......||.:|.|||:..|..|...|.:.....|    |..|.
  Fly   332 LTGGILVSIVFLSATLVAGFLLPAVHHALHWRCQICYVTCLLFGKILLAIEELSSSLQPGSAACH 396

  Fly   275 TAGFLGYFSVIAAFFWLSVISLTLW--------NSFSGNSSWLNRFLPQNRFLSYNLYAWGMALL 331
            |......|..:||||||:.:...:|        :|...|...|.|:|       |:|||||..||
  Fly   397 TLAITMQFFFLAAFFWLNTMCFNIWWTFRDFRPSSLERNQEALRRYL-------YSLYAWGGPLL 454

  Fly   332 LTAITYIADQVVKNEKLRPRVGVGK-NCWIYTGDMTVMIYFYGPMLLIIVFNITMFVLTAFRIM- 394
            :|.:....||:.:...|||  |.|: .||....::::..|||||:.|::..||.:||.|..::. 
  Fly   455 ITFVAACVDQLPETTLLRP--GFGQLYCWFDNRNLSIFAYFYGPIGLLLCANIALFVSTTHQLTC 517

  Fly   395 -KVKKEAQNFTQQQKTTNRLNSDKQTYALFLRLFIIMGLSWSLEIISFLL-SKNQAWAKAFMVAD 457
             ..|::....:.::....|         :.|:|.::||::|..:|:|:|: ..:..|    ...|
  Fly   518 GLWKRDDVKSSSEKSALGR---------VCLKLVVVMGVTWIADILSWLVGGPHGVW----FFTD 569

  Fly   458 YFNWSQGTVIFLLFVLRP 475
            ..|..||..||::...:|
  Fly   570 LINALQGVFIFIVVGCQP 587

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_663308.1 Methuselah_N 26..204 CDD:429053 40/208 (19%)
7tmB3_Methuselah-like 208..486 CDD:410632 79/312 (25%)
TM helix 1 210..235 CDD:410632 5/52 (10%)
TM helix 2 244..266 CDD:410632 7/21 (33%)
TM helix 3 274..301 CDD:410632 9/34 (26%)
TM helix 4 318..338 CDD:410632 9/19 (47%)
TM helix 5 364..393 CDD:410632 11/28 (39%)
TM helix 6 415..442 CDD:410632 7/26 (27%)
TM helix 7 450..475 CDD:410632 6/24 (25%)
mthl1NP_573140.1 7tmB3_Methuselah-like 326..598 CDD:410632 78/284 (27%)
TM helix 1 327..352 CDD:410632 4/24 (17%)
TM helix 2 362..384 CDD:410632 7/21 (33%)
TM helix 3 396..423 CDD:410632 9/26 (35%)
TM helix 4 441..461 CDD:410632 11/26 (42%)
TM helix 5 485..515 CDD:410632 11/29 (38%)
TM helix 6 530..557 CDD:410632 8/35 (23%)
TM helix 7 562..587 CDD:410632 7/28 (25%)

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