DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl3 and adgrg1

DIOPT Version :9

Sequence 1:NP_001286526.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001018317.1 Gene:adgrg1 / 324948 ZFINID:ZDB-GENE-030131-3671 Length:648 Species:Danio rerio


Alignment Length:584 Identity:109/584 - (18%)
Similarity:196/584 - (33%) Gaps:217/584 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 GSYLYEGLLIPAHLTAEYDYKLLADDSKEKVASHVRGCACHLRP---------CIRF-------- 90
            |:|:::|    ||:           :.|||.....|     |:|         .:||        
Zfish   160 GNYIFDG----AHI-----------NCKEKFCDEAR-----LKPRGANMIEEVVMRFNAKGRVDL 204

  Fly    91 CCPQYQKMQKSKCYGDMSEDELNKHD--------------PFVNVTLSDGSVVRRHFKEDLIVQS 141
            .|.|...::        .::|...|:              |.|.:..|..||.||.         
Zfish   205 PCAQGTVIE--------MDEEFTGHNFTVPAPRFVDANTIPSVYIPSSLRSVSRRK--------- 252

  Fly   142 DLAKPGCPRMYFLNHELPGNEFTLFENG----SLLRHWDKVELSKREYCVQHLSFKDDSIRIAPH 202
              :|..|  .|:.|.       ||||.|    :||.  |.|.||.....:::|.   :.::|..|
Zfish   253 --SKVVC--TYYKNK-------TLFERGPSKSALLD--DIVGLSVENETIRNLI---EPVKIRFH 301

  Fly   203 ---FCPLSSEHSRTWKT------------------------------------------------ 216
               |.|.||....:|.|                                                
Zfish   302 HRPFAPDSSGRCVSWDTKQDNEVNWKDDGCDTVKINEEQTECHCNHLTYFAILVQVEQKSTVRHL 366

  Fly   217 --------VAIVISLI-CIILTISVYLYVEKLRNLHGKCFICY---LASLFLGYFFLVL-----N 264
                    |...:||: |::|   .|...::.|....:..:.:   :.::||...|.:|     |
Zfish   367 KALTFITAVGCAVSLVSCLVL---FYWLCKRRRGKKNQISLVHRGLVVAIFLLCLFFILTGILAN 428

  Fly   265 VWKYSSGFCVTAGFLGYFSVIAAFFWLSVISLTLWNSFSGNSSWLNRFLPQNRFLSYNLYAWGMA 329
            |  .:...|...|.|.::.:::...|:   ::.::::|.......|..||   ...:.|..:|..
Zfish   429 V--ANETVCQLTGSLLHYGLLSTLCWM---AMEVFHTFLLVRKVFNSPLP---IWIFYLMGFGFP 485

  Fly   330 LLLTAITYIADQVVKNEKLRPRVGVG---KNCWIYTGDMTVMIYF---YGPMLLIIVFNITMFVL 388
            .||.:|......:....|::|...|.   :.||:..||.:.:.::   .|.:.:::...:.|..|
Zfish   486 FLLVSILLSVGDIYGERKIKPSDDVNNPYRMCWMTEGDKSQLAHYIINIGLLAVVVSSGLVMLFL 550

  Fly   389 TAFRIMKVKKEAQNFTQQQKTTNRLNSD-KQTYALFLRLFIIMGLSWSLEIISFLLSKNQAWAKA 452
                   |.:|.:|           ..| |:.:..||.:       |.|..:     ....||..
Zfish   551 -------VVREIRN-----------RPDWKKIHVAFLSI-------WGLTCL-----YGTTWALG 585

  Fly   453 FMVADYFNWSQGTVIFLLFV---------LRPSTLKLLKERIKGGRD--EAGASDEHISLQNTK 505
            |:  |:..:|:.|:.....:         ||...|:.:|::.....|  .:|:|.:|:...|.|
Zfish   586 FL--DFGPFSEVTLFLFCIINSLQGFFLMLRYYALERMKKKDVSSSDGSSSGSSKQHMLQTNEK 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_001286526.1 Methuselah_N 26..204 CDD:284145 42/198 (21%)
7tm_4 216..436 CDD:304433 45/291 (15%)
adgrg1NP_001018317.1 GPS 312..354 CDD:280071 2/41 (5%)
7tm_4 369..611 CDD:304433 51/284 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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