DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl3 and Adgre1

DIOPT Version :9

Sequence 1:NP_001286526.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001007558.1 Gene:Adgre1 / 316137 RGDID:1359214 Length:932 Species:Rattus norvegicus


Alignment Length:425 Identity:99/425 - (23%)
Similarity:155/425 - (36%) Gaps:116/425 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   126 GSVVRRHFKEDLIVQSDLAKPGCPRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCVQHL 190
            |..|....|||.         ..|.:|.|.|..|..:                  |:|..||...
  Rat   563 GGTVTGERKEDF---------SKPIVYTLQHIQPKQK------------------SERSICVSWN 600

  Fly   191 SFKDDSIRIAPHFCPLSSEHSRTWKT-----------------------------VAIVISLICI 226
            :..:|. |..|..|. :.|.|.|...                             |..||||:|:
  Rat   601 TDVEDG-RWTPSGCE-TVEASETHTVCSCNRMTNLAIIMASGELTMEFSLYIISYVGTVISLVCL 663

  Fly   227 ILTISVYLYVEKLRN----LHGKCFICYLASLFLGYFFLVLNVWK--YSSGFCVTAGFLGYFSVI 285
            .|.|:.:|....::|    ||....:|    |||.....:..:.|  ..:...:.||||.|. .:
  Rat   664 ALAIATFLLFRAVQNHNTYLHLHLCVC----LFLAKILFLTGIDKTDNQTACAIIAGFLHYL-FL 723

  Fly   286 AAFFWLSVISLTLWNSFSGNSSWLNRFLPQN-RFLSYNLYAWGMALLLTAITYIADQVVKNEKLR 349
            |.|||:.|.::.|: ....|...:|.|..:| :.|....:.:|:.:::         |:.:..:.
  Rat   724 ACFFWMLVEAVMLF-LMVRNLKVVNYFSSRNIKMLHLCAFGYGLPVVV---------VIISATVH 778

  Fly   350 P-RVGVGKNCWIYTGDMTVMIY-FYGPMLLIIVFNITMFVLTAFRIMKVKKEAQNFTQQQKTTNR 412
            | ..|:...||:.|  .|..|: |.||:.:||..|..:...|.:.:.:......:...:.|.|..
  Rat   779 PWGYGMHNRCWLNT--ETGFIWSFLGPVCMIITINSALLAWTLWVLRQKLCSVNSEVSKLKDTRL 841

  Fly   413 LNSDKQTYALFLRLFIIMGLSWSLEIISFLLSKNQAWAKAFMVADYF---NWSQGTVIFLLFVLR 474
            |     |:....::| |:|.||.|.|.       |....|.::|..|   |..||..|||:..  
  Rat   842 L-----TFKAIAQIF-ILGCSWVLGIF-------QIGPLASIMAYLFTTINSLQGAFIFLIHC-- 891

  Fly   475 PSTLKLLKERIKGGRDEAGASDEHISLQNTKIDPS 509
                 ||..:::         ||:..|...|.|.|
  Rat   892 -----LLNRQVR---------DEYRKLLTRKTDLS 912

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_001286526.1 Methuselah_N 26..204 CDD:284145 17/77 (22%)
7tm_4 216..436 CDD:304433 58/257 (23%)
Adgre1NP_001007558.1 EGF_CA 33..63 CDD:238011
EGF_CA 81..>109 CDD:214542
EGF_CA 133..172 CDD:214542
EGF_CA 173..>203 CDD:214542
EGF_CA 222..255 CDD:214542
cEGF 245..275 CDD:289433
EGF_CA 272..>301 CDD:214542
EGF_CA 319..359 CDD:284955
Cell attachment site. /evidence=ECO:0000255 507..509
GPS 592..641 CDD:197639 10/50 (20%)
7tm_2 646..886 CDD:278432 67/269 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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