DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl3 and Adgrg3

DIOPT Version :9

Sequence 1:NP_001286526.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:XP_038954076.1 Gene:Adgrg3 / 291854 RGDID:1305674 Length:574 Species:Rattus norvegicus


Alignment Length:351 Identity:73/351 - (20%)
Similarity:126/351 - (35%) Gaps:110/351 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 WDKVELSK-----REYC-VQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISLICII-LTISV 232
            ||....|.     |..| ..||:|  .::.:.|   .|....:||...::...|.:.:| |..::
  Rat   255 WDSHGCSTEPGDGRTVCRCDHLTF--FALL
LRP---TLDQATARTLTRISQAGSAVSMIFLAFTM 314

  Fly   233 YLYV-----------EKLRNLHGKCFICYLASLFLGYFFLVLNVWKYSSG---FC-VTAGFLGYF 282
            .|||           |....:|    :....||||.....::||...|.|   .| |.|....||
  Rat   315 VLYVAFRFSLQRFKSEDAPKIH----MALSTSLFLLNLTFLINVGSGSQGPPASCWVRAAIFHYF 375

  Fly   283 SVIAAFFW-------LSVISLTLWNSFSGNSSWLNRFLPQNRFLSYNLYAWGMALLLTAITYIAD 340
             ::..|.|       |.::.:.::|::.|           :.||..:|..||:.:|:.       
  Rat   376 -LLCVFTWMGLEAFHLYLLVIKVFNTYFG-----------HYFLKLSLLGWGLPVLIV------- 421

  Fly   341 QVVKNEKLRPRVGVGKN-------------------CWIYTGDMTVMIYFYGPMLLIIVFNITMF 386
                       :|||.:                   || :..:..:....:|..|:..:|...:.
  Rat   422 -----------IGVGSSNSYGVYTIRDQENRTSLELCW-FQKEPALYATVHGYFLVTFLFGAVVL 474

  Fly   387 VLTAFRIMKVKKEAQNFTQQQKTTNRLNSDKQTY---ALFLRLFIIMGLSWSLEIISFL-LSKNQ 447
            .:.|::|         ||....|..:  ...||:   ...|.|..::|::|.|.:::.| ||   
  Rat   475 AMVAWKI---------FTLPSVTAGK--GQGQTWKSVLTVLGLSSLVGMTWGLAVLTPLGLS--- 525

  Fly   448 AWAKAFMVADYFNWSQGTVIFLLFVL 473
                ...:....|..||..||..|::
  Rat   526 ----TVYIFTLLNSLQGLFIFCWFII 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_001286526.1 Methuselah_N 26..204 CDD:284145 9/34 (26%)
7tm_4 216..436 CDD:304433 51/264 (19%)
Adgrg3XP_038954076.1 GPS 244..282 CDD:396408 8/28 (29%)
7tm_GPCRs 292..551 CDD:421689 63/309 (20%)
TM helix 1 294..319 CDD:410628 6/24 (25%)
TM helix 2 333..355 CDD:410628 6/25 (24%)
TM helix 3 366..393 CDD:410628 7/27 (26%)
TM helix 4 406..426 CDD:410628 8/37 (22%)
TM helix 5 454..481 CDD:410628 4/26 (15%)
TM helix 6 495..522 CDD:410628 7/26 (27%)
TM helix 7 524..549 CDD:410628 8/31 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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