DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl3 and mthl12

DIOPT Version :10

Sequence 1:NP_663308.1 Gene:mthl3 / 36961 FlyBaseID:FBgn0028956 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster


Alignment Length:505 Identity:170/505 - (33%)
Similarity:274/505 - (54%) Gaps:55/505 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 TAFLLLLLQNSNAEIPGCDFFDTVDISKAPRFSNGSYLYEGLLIPAHLTAEYDYKLLADDSKEKV 73
            |..::.:.:||:|:||.|.:.:|::||...|. |.:|:||...|||:||.|:|||.|.|.||...
  Fly    10 TLIIVTIAKNSSAKIPHCKYDETINISHFKRL-NDAYIYEHFEIPANLTGEFDYKELMDGSKVPT 73

  Fly    74 A-SHVRGCACHLRPCIRFCCPQYQKMQKSKCYG-----------DMSEDELNKHDPFVNVTLSDG 126
            . .::|||.|.:|||||.||.:...:...:|..           |::..::...||    ||::.
  Fly    74 EFPNLRGCICKVRPCIRICCARKNILSNGECSDGVKNEIKLTMLDLTMQDILLTDP----TLAEL 134

  Fly   127 SVVRRHFKEDLIVQSDLAKPGCPRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCVQHLS 191
            :::.::...:|::..:..:| |..:..|..:    |:|:.::||:|.|.....||..:||:....
  Fly   135 NMIPQYNSTELLILREQFQP-CDEIVSLKRD----EYTILKDGSILLHTSAEILSNDQYCLYPEI 194

  Fly   192 FKD--DSIRIAPHFCPLSSEHSRTWKTVA--IVISLICIILTISVYLYVEKLRNLHGKCFICYLA 252
            :.|  ::|||....|     :......:|  .|||::..|||::|||.|||||||.|||.||.|.
  Fly   195 YSDFPETIRIINRRC-----YRNVMPGIAQLSVISVVGFILTLAVYLSVEKLRNLLGKCLICSLF 254

  Fly   253 SLFLGYFFLVLNVWKYSSGFCVTAGFLGYFSVIAAFFWLSVISLTLWNSFSGNSSWLNRFLPQNR 317
            |:|:.||...::.::.....|..||::.||..::::.|.||:|..||..|:.    |||..||.|
  Fly   255 SMFMEYFIWTMDYFRLLQSICSAAGYMKYFFSMSSYLWFSVVSFHLWELFTS----LNRHEPQYR 315

  Fly   318 FLSYNLYAWGMALLLTAITYIADQVVKNEKLRPRVGVGKNCWI----YTG----DMTVMIYFYG- 373
            ||.||.:.|..|.:.|.:.:..:|:.:|:.       ||:.|:    |.|    |.....:||. 
  Fly   316 FLIYNTFVWCTAAIPTVVIFSMNQMWENDP-------GKSEWLPLVGYFGCSVKDWNSSSWFYSH 373

  Fly   374 -PMLLIIVFNITMFVLTAFRIMKVKKEAQNFTQ-QQKTTNRLNSDKQTYALFLRLFIIMGLSWSL 436
             |::::..||:.||||||..|.||||..::|.| .::.|..|..:.|||..|:|||:|||.||.|
  Fly   374 IPIVILNSFNVIMFVLTAIYIWKVKKGVKSFAQHDERNTTCLEFNVQTYIQFVRLFLIMGASWLL 438

  Fly   437 EIISFLLSKNQAWAKAFM--VADYFNWSQGTVIFLLFVLRPSTLKLLKER 484
            :.::.|...:.......:  :..|.|.:.|.:||:|.:|:.||.|::.||
  Fly   439 DQLTRLAEDSHLLLDTIVLNLTVYLNAAFGILIFVLLILKGSTFKMIMER 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl3NP_663308.1 Methuselah_N 26..204 CDD:429053 57/191 (30%)
7tmB3_Methuselah-like 208..486 CDD:410632 106/292 (36%)
TM helix 1 210..235 CDD:410632 9/26 (35%)
TM helix 2 244..266 CDD:410632 10/21 (48%)
TM helix 3 274..301 CDD:410632 10/26 (38%)
TM helix 4 318..338 CDD:410632 7/19 (37%)
TM helix 5 364..393 CDD:410632 12/30 (40%)
TM helix 6 415..442 CDD:410632 13/26 (50%)
TM helix 7 450..475 CDD:410632 7/26 (27%)
mthl12NP_731791.2 Methuselah_N 27..209 CDD:429053 57/191 (30%)
7tmB3_Methuselah-like 220..488 CDD:410632 103/278 (37%)
TM helix 2 246..268 CDD:410632 10/21 (48%)
TM helix 3 276..303 CDD:410632 10/26 (38%)
TM helix 4 316..336 CDD:410632 7/19 (37%)
TM helix 5 364..394 CDD:410632 11/29 (38%)
TM helix 6 410..444 CDD:410632 15/33 (45%)
TM helix 7 449..479 CDD:410632 7/29 (24%)

Return to query results.
Submit another query.