DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and adgrg3

DIOPT Version :9

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_021333690.1 Gene:adgrg3 / 799479 ZFINID:ZDB-GENE-140106-110 Length:420 Species:Danio rerio


Alignment Length:435 Identity:100/435 - (22%)
Similarity:163/435 - (37%) Gaps:120/435 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 QKSKCYGDM-----------SEDELNKHDP------FVNVTLSDGSVVRRHFKEDLIVQSDLAKP 143
            :||.|..::           ..::||..||      .:.|.|....|            ::|::|
Zfish     9 RKSVCLNNVVSSLSLVVLAQEGNDLNGSDPVLLKQSVLGVWLGTTEV------------NNLSQP 61

  Fly   144 GCPRMYFLN-HELPGNEFTLF----ENGSLLRHWD----KVELSKREY-C-VQHLSFKDDSIRIA 197
              .::.|.| |....|...::    :||.  .:|.    |..:...:: | ..||||  .::.|:
Zfish    62 --VQLKFRNTHNQTENGICVYWHLEKNGG--GNWSTDGCKTNIDNGDFVCSCNHLSF--FAVLIS 120

  Fly   198 PHFCPLSSE--HSRTWKTVAIVISLICIILTISVYLYVEKLRNLHGKCFICYLAS-LFLGYFFLV 259
            |.. |..|.  |......|...:|:....|.|.::|...|.:..|.......|:| |||.:...:
Zfish   121 PQI-PEKSHIVHLNYISYVGSALSIAFTSLVIVLFLCQRKKQCEHSLVIHVQLSSCLFLLHISFL 184

  Fly   260 LNVW----KYSSGFCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPENPFRAYNL 320
            .:||    ..|...|.|.|.|.::.::|.|.|.::.|.|           |:.||    .|.:|:
Zfish   185 CSVWFSGHSDSDSVCQTIGLLLHWCLLATFTWTAIEGFH-----------LYLLL----VRVFNI 234

  Fly   321 Y-----------AWGIPLI------MTAI-----TYTADQVVKNEKLRPRVGVGKNCWIYTGDMT 363
            |           .||:|.:      ||.:     .||..:......|         ||: |.:..
Zfish   235 YIKRYMLKLSLMGWGVPTVTAMICGMTKVYGKYTLYTDQENSTATSL---------CWV-TTNTV 289

  Fly   364 VMIYFYGPMLLLIAFNIIMFVLSAIYIYNIKKNVKGLVHKQQTNQQINDQQM----FAIFLRLFI 424
            :.|...|.:.|::.||:.|..:..:.:..::          |.|.||:.|:.    ....|.|..
Zfish   290 IYITVNGYLGLVMLFNMAMLAVVVVKMRQLR----------QQNVQIDHQKRAWKDCVSLLGLCF 344

  Fly   425 LMGLSWSFEILSFLLTKQQAWARALMVADYFNWSQGTIIFVLFIL 469
            ::|:.|.   |:| .|.......||.|....|..||..|| |:||
Zfish   345 VLGVPWG---LAF-STHGPLSLPALYVFTILNSFQGVFIF-LWIL 384

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:284145 27/132 (20%)
7tm_4 213..>385 CDD:304433 47/198 (24%)
adgrg3XP_021333690.1 GPS 77..118 CDD:307782 9/44 (20%)
7tm_GPCRs 132..393 CDD:333717 70/293 (24%)
TM helix 1 132..156 CDD:320095 4/23 (17%)
TM helix 2 166..187 CDD:320095 5/20 (25%)
TM helix 3 200..222 CDD:320095 6/21 (29%)
TM helix 4 242..258 CDD:320095 3/15 (20%)
TM helix 5 287..310 CDD:320095 6/22 (27%)
TM helix 6 333..358 CDD:320095 7/28 (25%)
TM helix 7 362..387 CDD:320095 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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