DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and adgre5b.3

DIOPT Version :9

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_005160275.1 Gene:adgre5b.3 / 792970 ZFINID:ZDB-GENE-121214-275 Length:756 Species:Danio rerio


Alignment Length:467 Identity:96/467 - (20%)
Similarity:178/467 - (38%) Gaps:121/467 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 IRFCCPQYQ----KMQKSKCYGDMSEDELNKHDPFVNVTLSDGSVVRRHFKEDLIVQSDLAKPGC 145
            :|...||.:    ||:....|.:::... |:..|..:||||.||.   ||..........:.||.
Zfish   278 MRLIGPQLKDPVTKMETQNTYAEVAVTR-NQTPPSGSVTLSTGSA---HFNTSWETVVGKSYPGF 338

  Fly   146 PRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCV--------------QHLS------FK 190
            ..:..::::...:...||  .|:.|....|:..:..|.:              :|||      |.
Zfish   339 AFVALVSYKDMNSSSDLF--NSMAREKSDVKEKQITYKLNSKVVTAVVSNPDTKHLSKPVTLIFT 401

  Fly   191 DDSIRI----APHFCPLSSEHSRTWK--------------------------------------- 212
            .:..|.    ..:.|...||..|.|.                                       
Zfish   402 HEEKRAESEGVAYSCVYWSESERGWSGRGCELAWSNSTHTACSCSHLSSFAVLMALYPVEDTFEL 466

  Fly   213 ----TVAIVISLICIILTISVYLY---VEKLRN-LHGKCFIC-YLASLFLGYFFLVLNVWKYSSG 268
                .|.:|:||||:||.|..:.:   ::..|| :|....:| ::|.|   .|...::.......
Zfish   467 VVITRVGLVLSLICLILCILTFRFCRSIQGTRNSIHLHLSVCLFIADL---VFLCGISSTHNQVA 528

  Fly   269 FCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPENPFRAYNLYA--WGIPLIMTA 331
            ..:.||.|.:| .::||.|:.:.|:.|   :.:.....|..|     :...:||  :|:||::.:
Zfish   529 CAIVAGLLHFF-FLSAFCWMLLEGVQL---YRMVVLVFHTTL-----KHLYMYAVGYGVPLVIVS 584

  Fly   332 ITYTADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFYGPMLLLIAFNIIMFVLS----AIYIYN 392
            |:..|  |.|.      .|..::||:......::.:|. |:.:::..||.:|:::    |:...:
Zfish   585 ISAIA--VPKG------YGTDRHCWLSLEGYLILSFFI-PVCIIVILNITVFIITVWKLALKFSS 640

  Fly   393 IKKNVKGLVHKQQTNQQINDQQMFAIFLRLFILMGLSWSFEILSFLLTKQQAWARALMVADYFNW 457
            :..::..| ||.::        ..|..:....::|.||.|   .|.|.::......|.:....|.
Zfish   641 LNPDLSKL-HKIRS--------FLATAVAQLCVLGGSWVF---GFFLFQKNGTEVMLYLFIILNS 693

  Fly   458 SQGTIIFVLFIL 469
            .||.:||::..|
Zfish   694 LQGALIFIMHCL 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:284145 29/143 (20%)
7tm_4 213..>385 CDD:304433 44/178 (25%)
adgre5b.3XP_005160275.1 EGF_CA 32..>62 CDD:214542
EGF_CA 72..105 CDD:214542
EGF_CA <121..152 CDD:214542
EGF_CA 154..188 CDD:214542
GPS 416..460 CDD:197639 5/43 (12%)
7tm_2 466..699 CDD:278432 59/265 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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