DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and adgrd2

DIOPT Version :9

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_021334184.1 Gene:adgrd2 / 571770 ZFINID:ZDB-GENE-081104-190 Length:1145 Species:Danio rerio


Alignment Length:489 Identity:97/489 - (19%)
Similarity:181/489 - (37%) Gaps:120/489 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 EGLLIPAH-LTAEYDYKLLADDSKEKVASHVR---GCACHLRPCIRFCCPQYQKMQKS------- 98
            :.:.|.:| :..:...|||::|      .||.   |.....|.||.......::::.:       
Zfish   604 DSVQIHSHNIKLQVQQKLLSED------PHVSAFCGSDGGNRDCISVPAKNMKELRNNDFRKVTV 662

  Fly    99 --------KCYGDMSEDELNKHDPFVNVTL----SDGS--VVRRHFKEDLIVQSDLA--KPGCPR 147
                    ||..:..|          |::|    :|||  .|.......:|..:.||  :|....
Zfish   663 LNTWFSSVKCLSEKEE----------NISLFPIVTDGSQRFVGTVLGSSVISSTVLADEQPVSVA 717

  Fly   148 MYF-LNHELPGN-----------EFTLFENGS-------------------LLRHWDKVELSKRE 181
            ::| |.|.|...           :|.|..:|.                   ...|.....|..:.
Zfish   718 IHFTLQHRLQNTSVKFIPVCAFWDFDLMSDGGGWSTKGCVVISTQNNSTSCYCNHTTNFALLLQI 782

  Fly   182 YCVQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNLHGKCFIC 246
            |.||..:..|..::|.              ..:...:||..:|.|..:::.|...::........
Zfish   783 YEVQRDAVHDAGLQIL--------------SLIGSAVSLCALIFTFILFVAVGVPKSDRTTVHKN 833

  Fly   247 YLASLFLGYFFLVLNVWKYSSG---FCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHR 308
            .:|:|.:..|.|:|:.|...|.   :.|||  |.:...:::|.|:.|.|:.|..|....:     
Zfish   834 LMAALIVAQFLLILSDWAAGSQEACWLVTA--LLHLFFLSSFCWMLVEGLLLWSKVVSVN----- 891

  Fly   309 LLPENPFRAYNLYAWGIPLIMTAITY--TADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFYGP 371
            :..:...:.|.:..||:|:::.|:|.  |.||....:          :||:.. ..:|:..|.||
Zfish   892 ISEDRRMKMYYVLGWGLPVVIVAVTLVATLDQYKAQQ----------HCWLNL-QSSVIWAFAGP 945

  Fly   372 MLLLIAFN-IIMFVLSAIYIYNIKKNVKGLVHKQQTNQQINDQQMFAI--FLRLFILMGLSWSFE 433
            :|.::|.| :::|.:..:.:.:.::..|.|.....:.....|....|.  .|.|..::||:|...
Zfish   946 VLFVLAVNAVVLFRVVLVTVSSARRRAKMLTPSSDSKLHTLDLTWAATRPVLILLPVLGLTWLCG 1010

  Fly   434 ILSFLLTKQQAWARALMVADYFNWSQGTIIFVLF 467
            :|..|   ....|...:..:.|   ||..||:::
Zfish  1011 VLVHL---SDVMAYLFITLNAF---QGLYIFLVY 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:284145 39/213 (18%)
7tm_4 213..>385 CDD:304433 41/177 (23%)
adgrd2XP_021334184.1 LamG 204..402 CDD:328935
GPS 735..779 CDD:307782 4/43 (9%)
7tmB2_GPR144 792..1054 CDD:320383 60/285 (21%)
TM helix 1 794..819 CDD:320383 5/38 (13%)
TM helix 2 828..850 CDD:320383 5/21 (24%)
TM helix 3 859..886 CDD:320383 9/28 (32%)
TM helix 4 898..918 CDD:320383 6/19 (32%)
TM helix 5 935..964 CDD:320383 8/28 (29%)
TM helix 6 988..1015 CDD:320383 7/26 (27%)
TM helix 7 1017..1042 CDD:320383 6/25 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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