DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and adgrv1

DIOPT Version :9

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:XP_009300028.1 Gene:adgrv1 / 415105 ZFINID:ZDB-GENE-040624-6 Length:6208 Species:Danio rerio


Alignment Length:392 Identity:76/392 - (19%)
Similarity:136/392 - (34%) Gaps:105/392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   167 SLLRHWDKVE---LSKREYCVQHLSFKDDSIRIAPHFCPLSSEHSRTWKTVAIVISL-------- 220
            ||...|::..   ||..::|    ...||:    .::...:..|...:...|.:.||        
Zfish  5758 SLCLLWNQAAESWLSDGQFC----RLVDDT----QNYVECACSHLSIYTAYAEIESLASFNEAFY 5814

  Fly   221 ----ICI----------ILTISVYLYVEK-LRNLHGKCF---ICYLASLFLGYFFLVLNVWKYSS 267
                |||          ::.....::..| |.::...|.   ||:|.|.|.|..|        |.
Zfish  5815 AAGFICISGFALAMVSHLMCARFLMFAAKLLTHMMVACLGTQICFLVSAFRGRMF--------SE 5871

  Fly   268 GFCVTAGFLGYFSVMAAFFWLSVIGIHL-RIKFSLASNCLHRLLPENPFRAYNLYAWGIPLIMTA 331
            ..|...|...::..::.|.|:.|..|:. :|   |..|..|   .|..:..|.|.:||:|.::..
Zfish  5872 DSCAALGLFFHYFHLSQFSWMLVQAINFWQI---LVMNDEH---TERRYLLYFLLSWGLPALVII 5930

  Fly   332 ITYTADQVVKNEKLRPRVGVGKNCW-------IYTGDMTVMIYFYG--------PMLLLIAFNII 381
            :...             |.:|...|       :..||:..:...|.        |::.|:...:|
Zfish  5931 VLVV-------------VLLGGFGWSIHSVYGLVQGDLCFIPNVYAALCTAALVPLICLVGVLVI 5982

  Fly   382 MFVLSAIYIYNIKKNVKGL--VHKQQTNQQINDQQ--MFAIFLRLFILMGLSWSFEILSFLLTKQ 442
            .     |:.|.:.:..|..  :::.:||.......  :||:...:.:..||..::..:       
Zfish  5983 F-----IHAYQVTQQWKAYDDIYRGRTNSSEVPMMLYLFALVTLVCVWAGLHMAYRYI------- 6035

  Fly   443 QAWARALMVADYFNWSQGTIIF-VLFILKPSILKLIIAGGRQNLPGSHHNSRSKAARYNSTHTAC 506
              |...|:|  .||...|..:| |.|::.    ..:...|:.......:...|..:.|.||..|.
Zfish  6036 --WMLILLV--IFNIFLGLYVFSVYFVMH----NQLFWPGKATYTVEMNGHSSPDSIYQSTGAAT 6092

  Fly   507 EG 508
            .|
Zfish  6093 VG 6094

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:284145 8/36 (22%)
7tm_4 213..>385 CDD:304433 42/213 (20%)
adgrv1XP_009300028.1 Calx-beta 138..230 CDD:295344
Calx-beta 256..355 CDD:295344
Calx-beta 766..853 CDD:295344
Calx-beta 880..971 CDD:295344
Calx-beta 996..1082 CDD:295344
Laminin_G_3 1343..1484 CDD:290121
Calx-beta 1576..1654 CDD:295344
Calx-beta 1712..1794 CDD:295344
Calx-beta 1849..1939 CDD:295344
Calx-beta 1975..2065 CDD:295344
Calx-beta 2105..2193 CDD:295344
Calx-beta 2220..2310 CDD:295344
Calx-beta 2590..2656 CDD:295344
Calx-beta 2951..3039 CDD:295344
Calx-beta <3574..3614 CDD:295344
Calx-beta 3641..3729 CDD:295344
Calx-beta <3788..3864 CDD:295344
Calx-beta 4021..4112 CDD:295344
Calx-beta 4257..4345 CDD:295344
Calx-beta 4390..4480 CDD:295344
Calx-beta 5003..5085 CDD:295344
7tm_4 <5871..>5926 CDD:304433 15/60 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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