DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl4 and mth

DIOPT Version :10

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_728521.1 Gene:mth / 38058 FlyBaseID:FBgn0023000 Length:522 Species:Drosophila melanogaster


Alignment Length:505 Identity:272/505 - (53%)
Similarity:363/505 - (71%) Gaps:13/505 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRILLIAVLFLLMPKSNAEIPGCDFFDTVDISKAPRFSNGSYLYEGLLIPAHLTAEYDYKLLADD 65
            :||..:.::.|::.||.|:|..||:|||||||.|.:..|||||:||||:||.||.|||:::|.||
  Fly     7 LRISTVILVVLVIQKSYADILECDYFDTVDISAAQKLQNGSYLFEGLLVPAILTGEYDFRILPDD 71

  Fly    66 SKEKVASHVRGCACHLRPCIRFCCPQYQKMQKSKCYGDMSEDELNKHDPFVNVTLSDGSVVRRHF 130
            ||:|||.|:|||.|.|:||:|||||....|....||.:||::||.:.|||:||||.||||.||||
  Fly    72 SKQKVARHIRGCVCKLKPCVRFCCPHDHIMDNGVCYDNMSDEELAELDPFLNVTLDDGSVSRRHF 136

  Fly   131 KEDLIVQSDLAKPGCPRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCVQHLSFKD---D 192
            |.:||||.||..| |..|::|::....:::||||||:..||:|:|.|.|||||:|||:|.|   .
  Fly   137 KNELIVQWDLPMP-CDGMFYLDNREEQDKYTLFENGTFFRHFDRVTLRKREYCLQHLTFADGNAT 200

  Fly   193 SIRIAPHFCPLSSEHSRTWKTVAIVISLICIILTISVYLYVEKLRNLHGKCFICYLASLFLGYFF 257
            |||||||.|.:..  |.|.:||.::.||||::|||:|||:|:||:||||||||||:..||:||.|
  Fly   201 SIRIAPHNCLIVP--SITGQTVVMISSLICMVLTIAVYLFVKKLQNLHGKCFICYMVCLFMGYLF 263

  Fly   258 LVLNVWKYSSGFCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPENPFRAYNLYA 322
            |:|::|:.|..||..|||||||.|||||||||||.:||...|..:|:..:|.|.|:.|.|||.||
  Fly   264 LLLDLWQISISFCKPAGFLGYFFVMAAFFWLSVISLHLWNTFRGSSHKANRFLFEHRFLAYNTYA 328

  Fly   323 WGIPLIMTAITYTADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFYGPMLLLIAFNIIMFVLSA 387
            ||:.:::|.||..||.:|:|:...||||...:|||||...:.|:||||||:.||||||.||:|:|
  Fly   329 WGMAVVLTGITVLADNIVENQDWNPRVGHEGHCWIYTQAWSAMLYFYGPMVFLIAFNITMFILTA 393

  Fly   388 IYIYNIKKNVKGLVHKQQTNQQIN-DQQMFAIFLRLFILMGLSWSFEILSFLLTKQQAWARALMV 451
            ..|..:||:::...|:|:..|::| |:|.:..||||||:||||||.||.|:.....|.||...:|
  Fly   394 KRILGVKKDIQNFAHRQERKQKLNSDKQTYTFFLRLFIIMGLSWSLEIGSYFSQSNQTWANVFLV 458

  Fly   452 ADYFNWSQGTIIFVLFILKPSILKLIIAGGRQNLPGSHH---NSRSKAAR 498
            |||.|||||.|||:||:||.|..:|:   ..:|.|.|..   ::||.|:|
  Fly   459 ADYLNWSQGIIIFILFVLKRSTWRLL---QERNHPKSTRSVISNRSMASR 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:429053 108/180 (60%)
7tmB3_Methuselah-like 205..477 CDD:410632 148/272 (54%)
TM helix 1 207..232 CDD:410632 13/24 (54%)
TM helix 2 241..263 CDD:410632 14/21 (67%)
TM helix 3 271..298 CDD:410632 20/26 (77%)
TM helix 4 315..335 CDD:410632 11/19 (58%)
TM helix 5 361..390 CDD:410632 17/28 (61%)
TM helix 6 411..438 CDD:410632 18/27 (67%)
TM helix 7 446..471 CDD:410632 16/24 (67%)
mthNP_728521.1 Methuselah_N 29..209 CDD:429053 108/180 (60%)
7tmB3_Methuselah-like 219..488 CDD:410632 147/271 (54%)
TM helix 2 247..269 CDD:410632 14/21 (67%)
TM helix 3 277..304 CDD:410632 20/26 (77%)
TM helix 4 321..341 CDD:410632 11/19 (58%)
TM helix 5 367..396 CDD:410632 17/28 (61%)
TM helix 6 418..445 CDD:410632 17/26 (65%)
TM helix 7 453..478 CDD:410632 16/24 (67%)

Return to query results.
Submit another query.