DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl4 and mthl12

DIOPT Version :10

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_731791.2 Gene:mthl12 / 261599 FlyBaseID:FBgn0045442 Length:488 Species:Drosophila melanogaster


Alignment Length:502 Identity:163/502 - (32%)
Similarity:265/502 - (52%) Gaps:58/502 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 VLFLLMPKSNAEIPGCDFFDTVDISKAPRFSNGSYLYEGLLIPAHLTAEYDYKLLADDSKEKVA- 71
            ::..:...|:|:||.|.:.:|::||...|. |.:|:||...|||:||.|:|||.|.|.||.... 
  Fly    12 IIVTIAKNSSAKIPHCKYDETINISHFKRL-NDAYIYEHFEIPANLTGEFDYKELMDGSKVPTEF 75

  Fly    72 SHVRGCACHLRPCIRFCCPQYQKMQKSKCYG-----------DMSEDELNKHDPFVNVTLSDGSV 125
            .::|||.|.:|||||.||.:...:...:|..           |::..::...||    ||::.::
  Fly    76 PNLRGCICKVRPCIRICCARKNILSNGECSDGVKNEIKLTMLDLTMQDILLTDP----TLAELNM 136

  Fly   126 VRRHFKEDLIVQSDLAKPGCPRMYFLNHELPGNEFTLFENGSLLRHWDKVELSKREYCVQHLSFK 190
            :.::...:|::..:..:| |..:..|..:    |:|:.::||:|.|.....||..:||:....:.
  Fly   137 IPQYNSTELLILREQFQP-CDEIVSLKRD----EYTILKDGSILLHTSAEILSNDQYCLYPEIYS 196

  Fly   191 D--DSIRIAPHFCPLSSEHSRTWKTVA--IVISLICIILTISVYLYVEKLRNLHGKCFICYLASL 251
            |  ::|||....|     :......:|  .|||::..|||::|||.|||||||.|||.||.|.|:
  Fly   197 DFPETIRIINRRC-----YRNVMPGIAQLSVISVVGFILTLAVYLSVEKLRNLLGKCLICSLFSM 256

  Fly   252 FLGYFFLVLNVWKYSSGFCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPENPFR 316
            |:.||...::.::.....|..||::.||..|:::.|.||:..||...|:    .|:|..|:..|.
  Fly   257 FMEYFIWTMDYFRLLQSICSAAGYMKYFFSMSSYLWFSVVSFHLWELFT----SLNRHEPQYRFL 317

  Fly   317 AYNLYAWGIPLIMTAITYTADQVVKNEKLRPRVGVGKNCWI----YTG----DMTVMIYFYG--P 371
            .||.:.|....|.|.:.::.:|:.:|:.       ||:.|:    |.|    |.....:||.  |
  Fly   318 IYNTFVWCTAAIPTVVIFSMNQMWENDP-------GKSEWLPLVGYFGCSVKDWNSSSWFYSHIP 375

  Fly   372 MLLLIAFNIIMFVLSAIYIYNIKKNVKGLVHKQQTNQ---QINDQQMFAIFLRLFILMGLSWSFE 433
            :::|.:||:|||||:||||:.:||.||......:.|.   :.| .|.:..|:|||::||.||..:
  Fly   376 IVILNSFNVIMFVLTAIYIWKVKKGVKSFAQHDERNTTCLEFN-VQTYIQFVRLFLIMGASWLLD 439

  Fly   434 ILSFLLTKQQAWARALM--VADYFNWSQGTIIFVLFILKPSILKLII 478
            .|:.|..........::  :..|.|.:.|.:||||.|||.|..|:|:
  Fly   440 QLTRLAEDSHLLLDTIVLNLTVYLNAAFGILIFVLLILKGSTFKMIM 486

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:429053 57/191 (30%)
7tmB3_Methuselah-like 205..477 CDD:410632 100/288 (35%)
TM helix 1 207..232 CDD:410632 9/26 (35%)
TM helix 2 241..263 CDD:410632 10/21 (48%)
TM helix 3 271..298 CDD:410632 10/26 (38%)
TM helix 4 315..335 CDD:410632 6/19 (32%)
TM helix 5 361..390 CDD:410632 14/30 (47%)
TM helix 6 411..438 CDD:410632 11/26 (42%)
TM helix 7 446..471 CDD:410632 9/26 (35%)
mthl12NP_731791.2 Methuselah_N 27..209 CDD:429053 57/191 (30%)
7tmB3_Methuselah-like 220..488 CDD:410632 100/279 (36%)
TM helix 2 246..268 CDD:410632 10/21 (48%)
TM helix 3 276..303 CDD:410632 10/26 (38%)
TM helix 4 316..336 CDD:410632 6/19 (32%)
TM helix 5 364..394 CDD:410632 13/29 (45%)
TM helix 6 410..444 CDD:410632 12/34 (35%)
TM helix 7 449..479 CDD:410632 9/29 (31%)

Return to query results.
Submit another query.