DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl4 and mth-2

DIOPT Version :9

Sequence 1:NP_788394.1 Gene:mthl4 / 36960 FlyBaseID:FBgn0034219 Length:517 Species:Drosophila melanogaster
Sequence 2:NP_001364698.1 Gene:mth-2 / 173752 WormBaseID:WBGene00017947 Length:971 Species:Caenorhabditis elegans


Alignment Length:340 Identity:69/340 - (20%)
Similarity:118/340 - (34%) Gaps:107/340 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   213 TVAIVISLICII----LT-ISVYLYVEKL-----------RNLHGKCFIC--YLASLFLGY-FFL 258
            |:..|::.:.|:    || .|:..|:..|           .||..:.|:.  |...|.|.| ||.
 Worm   667 TLGYVVNGLSIVSLAFLTFFSISAYINSLANSRLYSYVRGHNLARRDFLALIYHFDLLLFYVFFT 731

  Fly   259 VLNVWKYSSGFCVTAGFLGYFSVMAAFFWLSVIGIHLRIKFSLASNCLHRLLPENPFRAYNLYAW 323
            |.:....|...|.....:.|..::.:.| |::        |....|.| ..||...:|..|:...
 Worm   732 VFSNQDVSGDMCTAMAAVMYALLLCSLF-LTI--------FQALRNIL-VFLPTPAYRLLNICFG 786

  Fly   324 GIPLIMTAI-----------TYTADQVVKNEKLRPRVGVGKNCWIYTGDMTVMIYFYGPMLLLIA 377
            .:|:::|::           .:|        |...|...  .||:....:...|..  |:.:|:.
 Worm   787 TVPVLITSVALPFILSIFLLVFT--------KFFDRQDC--FCWVRPDYIVAAIII--PVTVLLL 839

  Fly   378 FNIIMFVLSAIYIYNIKKNVKGLVHKQQTNQQINDQQMFAIFLRLFIL---MGLSWSFEILSFLL 439
            ..:   |.::..||.:   ..|:..|........|..:....:.:.::   :||.|   ||.|  
 Worm   840 STV---VCTSFMIYKV---FCGMKRKFSQGGHHYDPNVITKIVSIVVMQISLGLPW---ILQF-- 893

  Fly   440 TKQQAWARALMVADYFN-W---------SQGTIIFVLFILK-------PSILKLIIAGGRQNLPG 487
                    ..:.:.|.. |         |||||:.::|:.|       .|.||            
 Worm   894 --------GTLYSPYTTFWHYTFTIVLGSQGTILLLIFLYKRYRAWQADSTLK------------ 938

  Fly   488 SHHNSRSKAARYNST 502
                ||.::...|||
 Worm   939 ----SRGQSYSKNST 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl4NP_788394.1 Methuselah_N 23..201 CDD:284145
7tm_4 213..>385 CDD:304433 40/201 (20%)
mth-2NP_001364698.1 GPS 607..656 CDD:197639
7tm_GPCRs 662..933 CDD:421689 61/306 (20%)
TM helix 1 664..690 CDD:410628 6/22 (27%)
TM helix 2 706..735 CDD:410628 10/28 (36%)
TM helix 4 779..803 CDD:410628 4/23 (17%)
TM helix 5 824..852 CDD:410628 6/32 (19%)
TM helix 6 868..897 CDD:410628 7/41 (17%)
TM helix 7 902..927 CDD:410628 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S8337
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.950

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