DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18467 and TPR2

DIOPT Version :9

Sequence 1:NP_611211.3 Gene:CG18467 / 36958 FlyBaseID:FBgn0034218 Length:237 Species:Drosophila melanogaster
Sequence 2:NP_188306.2 Gene:TPR2 / 820936 AraportID:AT3G16830 Length:1131 Species:Arabidopsis thaliana


Alignment Length:195 Identity:34/195 - (17%)
Similarity:78/195 - (40%) Gaps:43/195 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 LVMNYLVTEGYQEAAKRFMTEA----SVKPGPHMDTIGDRLRIQDAV----RVGQVKYAMDLATR 83
            |::.:|..|.::|:..:...|:    ::|........|:...::..:    :|...:|:|.    
plant    11 LILQFLDEEKFKESVHKLEQESGFFFNIKYFEEKALAGEWDEVEKYLSGFTKVDDNRYSMK---- 71

  Fly    84 IYPRLFETDNYVFFHMQQLRLIEMIRDQKMEKALKFAQSKAAGFSKVDPSHYHEVERTMGLLAF- 147
                       :||.:::.:.:|.:......||::........|:..:...|.|:.:.:.|..| 
plant    72 -----------IFFEIRKQKYLEALDRNDRAKAVEILAKDLKVFATFNEELYKEITQLLTLENFR 125

  Fly   148 DRPEYSPYGE------LMYYS----------YRQKVA-GEMNAAMLRCHEDESKSKEEPM--EPR 193
            :..:.|.||:      :||..          :|:|:| ....|:.||...::|.:.:..:  .||
plant   126 ENEQLSKYGDTKSARSIMYTELKKLIEANPLFREKLAFPSFKASRLRTLINQSLNWQHQLCKNPR 190

  Fly   194  193
            plant   191  190

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18467NP_611211.3 LisH 23..48 CDD:285685 4/20 (20%)
CLTH 58..209 CDD:287564 28/160 (18%)
CTLH 58..115 CDD:128914 7/60 (12%)
CRA 111..213 CDD:214806 21/103 (20%)
TPR2NP_188306.2 LisH 4..34 CDD:128913 5/22 (23%)
CTLH 34..92 CDD:128914 8/72 (11%)
CLTH <71..>135 CDD:402305 12/78 (15%)
WD40 348..657 CDD:421866
WD40 repeat 352..407 CDD:293791
WD40 repeat 413..451 CDD:293791
WD40 repeat 456..493 CDD:293791
WD40 repeat 500..536 CDD:293791
WD40 repeat 543..583 CDD:293791
WD40 repeat 591..628 CDD:293791
WD40 repeat 635..657 CDD:293791
WD40 828..1087 CDD:421866
WD40 repeat 835..869 CDD:293791
WD40 repeat 876..912 CDD:293791
WD40 repeat 918..958 CDD:293791
WD40 repeat 1010..1052 CDD:293791
WD40 repeat 1061..1088 CDD:293791
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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