DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP1

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:415 Identity:108/415 - (26%)
Similarity:207/415 - (49%) Gaps:71/415 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDP---ETKTDNNATPNNADQRKFYVDT 77
            :|.|.|...::.|::.|:.|||....:||     .|..|.   |....:....|||.:.      
Yeast    15 VVIDNGSGIIKAGFSGEERPKALEYCLVG-----NTKYDKVMLEGLQGDTFIGNNAQKL------ 68

  Fly    78 NYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEP-EYHPVLFSEASWNVRNNREKL 141
                  |..::::..:|.|::::||..|.:..|....|:|.:. ..||:|.:||..|...|||::
Yeast    69 ------RGLLKLRYPIKHGVVEDWDSMELIWSYVLNEVLQLQNIGEHPLLITEAPMNPLKNREQM 127

  Fly   142 TELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDF 206
            .:::||.::|.|.::...|||:.::|||.|..|||.|..:.|.||:::|:.|..::::..:||..
Yeast   128 AQVLFETFDVSALYVSNPAVLSLYASGRTTGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGAD 192

  Fly   207 LSRQCRQHLEKH-GIDLSPVYKIASKDVVKERDNGRFTLRK----LPENLTQSWQNYM--LQLMM 264
            ::.|.:..|.|. |:.|   :..:.:::|:       |:::    |.:|:.:..:.|:  .|.::
Yeast   193 ITEQLQFQLRKSAGVSL---FSSSEREIVR-------TMKEKVCYLAKNIKKEEEKYLQGTQDLI 247

  Fly   265 QDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLGAG-----QL 324
            ..|::                         |:|...:.|::|::..|.||...::|.|     .:
Yeast   248 STFKL-------------------------PDGRCIEVGNDRYRAPEILFSPQIIGLGYDGLSDM 287

  Fly   325 ASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGA 389
            ...|:...|.|:|..|..|::::||.|.|:||.:|:..||:......:::|:|:.:   ||::..
Yeast   288 CMQSIWKVDLDLRKPLLSSIILSGGTTTLKGFGDRMLWDLEALTKGTSKIKIIAPS---ERKYTT 349

  Fly   390 WIGGSILASIGTFQQMWISSQEYEE 414
            |||||||..:.|||::|....::.|
Yeast   350 WIGGSILTGLSTFQRLWTKKSDWLE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 108/415 (26%)
ARP1NP_011997.1 ACTIN 12..384 CDD:214592 108/415 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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