DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP9

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_013747.1 Gene:ARP9 / 855049 SGDID:S000004636 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:366 Identity:67/366 - (18%)
Similarity:137/366 - (37%) Gaps:89/366 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 PKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYVTVPRSNMEVQTYMKDGMID 99
            |:.|||          |.:...|:.|.:.|         |..||    ..:..|:...:::|.|.
Yeast    33 PELEIP----------TQIYRTTRQDGSYT---------YHSTN----KDNKAELIKPIQNGEII 74

  Fly   100 NWDLFEKVIDYAYANVI-----------QSEPEYHP-VLFSEASWNVRNNREKLTELMFEKYNVP 152
            :...|.:.:...:.:::           ::|....| :|.:..||: :::.|.:|:.:||...:.
Yeast    75 DISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWS-QSDLEIITQYVFESLEIN 138

  Fly   153 AFFLVKNAVLAAFSS-GRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSRQCRQHLE 216
            ....:..::.|.:|. ......::|.|..||..:|:.:...|...|...|:||..::...::.|.
Yeast   139 NLIQLPASLAATYSMISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMGGQSINDSLKKLLP 203

  Fly   217 K------HGIDLSPVYKIASKDVVK-----------ERDNGRFTLRKLPENLTQSWQNYMLQLMM 264
            :      ..:..||::::.|.|..|           :.|.|...:.::   :|..          
Yeast   204 QWDDDQIESLKKSPIFEVLSDDAKKLSSFDFGNENEDEDEGTLNVAEI---ITSG---------- 255

  Fly   265 QDFQMNVLQVLENPFDERVAAQIPTVHYEF-----PNGYHQDFGSERFKIAESLFDNAMLGAGQL 324
                .:..:|||.....:....:.....||     ..|.....|.:||:...:|..|        
Yeast   256 ----RDTREVLEERERGQKVKNVKNSDLEFNTFWDEKGNEIKVGKQRFQGCNNLIKN-------- 308

  Fly   325 ASTSVGMC-----DADVRLSLFGSVVVTGGNTLLQGFPERL 360
            .|..||:.     |.:...:::.::::.||.|.:.||.|.|
Yeast   309 ISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEAL 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 67/366 (18%)
ARP9NP_013747.1 COG5277 1..467 CDD:227602 67/366 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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