DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP3

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_012599.3 Gene:ARP3 / 853528 SGDID:S000003826 Length:449 Species:Saccharomyces cerevisiae


Alignment Length:462 Identity:112/462 - (24%)
Similarity:194/462 - (41%) Gaps:93/462 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALVFDPGHHSLRVGYAQEDSPKAEIPSVV------------GIGA--------------APETNL 53
            |:|.|.|....::|:|..|||....|:.:            |:||              ...||.
Yeast     8 AVVMDNGTGLTKLGFAGNDSPSWVFPTAIATAAPSNTKKSSGVGAPSAVSNEASYFGNSTSATNF 72

  Fly    54 DPET---KTDNNATPNNADQRKFYVDTNYVTVPRSNMEVQTY-MKDGMIDNWDLFEKVIDYAYAN 114
            :..|   .::|.:.....:...||:....:...:......:| ::.|.::|||..|:..:.:...
Yeast    73 NGATGGLLSNNLSGKRGTEDLDFYIGNEALVASQGPSYSLSYPIRHGQVENWDHMERFWENSIFK 137

  Fly   115 VIQSEPEYHPVLFSEASWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRA--------T 171
            .:::|||.|..|.:|...|...|||::.|:.||.:|....::...||||..:|..:        |
Yeast   138 YLRTEPEDHFFLLTEPPLNPPENREQVAEIFFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLT 202

  Fly   172 ALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKE 236
            ..|:|||...|..:||.||||:..|:...|:.|..::...:..|.:.|                |
Yeast   203 GTVIDSGDGVTHVIPVAEGYVIGSAIKNIPIAGRDITLFIQSLLRERG----------------E 251

  Fly   237 RDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVLQVLENPFDERVA--AQIPTVHYEFPNGYH 299
            .|....|..|:.:...     |:...::::|         |.||:..:  ||....:.|......
Yeast   252 ADTSLRTAEKIKQEYC-----YVCPDIVKEF---------NKFDKDPSKFAQFVVENQEKTRRKV 302

  Fly   300 QDFGSERFKIAESLFDNAMLGAGQ-------LASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFP 357
            .|.|.||| :|..:|.|..:.:..       :...::..|..|||..|:.::|::||:|:.:.|.
Yeast   303 VDIGYERF-LAPEIFFNPEIASSDFLTPLPTVVDQTIQACPIDVRKGLYNNIVLSGGSTMFKDFG 366

  Fly   358 ERLNRDLQLRAPSNTRL---KMISANGSV----------ERRFGAWIGGSILASIGTFQQMWISS 409
            .||.||  |::..|.|:   :::|...|.          ::|...|.|||:||....|:....:.
Yeast   367 RRLQRD--LKSIVNNRIAQSELLSGTKSTGVDVSVISHRKQRNAVWFGGSLLAQTAEFKGYCHTK 429

  Fly   410 QEYEEAG 416
            ::|||.|
Yeast   430 KDYEEYG 436

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 112/462 (24%)
ARP3NP_012599.3 COG5277 1..445 CDD:227602 112/462 (24%)
PTZ00280 5..446 CDD:240343 112/462 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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