DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_010255.1 Gene:ARP2 / 851532 SGDID:S000002187 Length:391 Species:Saccharomyces cerevisiae


Alignment Length:442 Identity:124/442 - (28%)
Similarity:203/442 - (45%) Gaps:80/442 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV 75
            |....:|.|.|...:::|.|.|:.|....||:||         .|..:.:..|:.  |...|..:
Yeast     2 DPHNPIVLDQGTGFVKIGRAGENFPDYTFPSIVG---------RPILRAEERASV--ATPLKDIM 55

  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAY-----------ANVIQSEPEYHPVLFSE 129
            ..:..:..||.:::...|::|:|.||...|.:.|||:           ..::.:||..:|:    
Yeast    56 IGDEASEVRSYLQISYPMENGIIKNWTDMELLWDYAFFEQMKLPSTSNGKILLTEPPMNPL---- 116

  Fly   130 ASWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLS 194
                  .||||:.|:|||||:....::...||||.::.|.::.:|||||...|..|||:|..|||
Yeast   117 ------KNREKMCEVMFEKYDFGGVYVAIQAVLALYAQGLSSGVVVDSGDGVTHIVPVYESVVLS 175

  Fly   195 QAVVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYM 259
            ....:..:.|    |...:||    |||     ::.:.....|.....|:|::.|.|  .:.:|.
Yeast   176 HLTRRLDVAG----RDVTRHL----IDL-----LSRRGYAFNRTADFETVRQIKEKL--CYVSYD 225

  Fly   260 LQLMMQDFQMNVLQVLENPFDERVAAQIPTV--HYEFPNGYHQDFGSERFKIAESLFDNAML--- 319
            |.|                 |.::|.:...:  .||.|:|.....|.|||:..|.||...::   
Yeast   226 LDL-----------------DTKLARETTALVESYELPDGRTIKVGQERFEAPECLFQPGLVDVE 273

  Fly   320 --GAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDL-QL-------RAPSNTRL 374
              |.|:|...:|...|.|:|.||:.::|::||:::..|.|.||.::| ||       ..||....
Yeast   274 QPGVGELLFNTVQSADVDIRSSLYKAIVLSGGSSMYPGLPSRLEKELKQLWFSRVLHNDPSRLDK 338

  Fly   375 KMISANGSVERRFGAWIGGSILASI-GTFQQMWISSQEYEEAGKSQVERKCP 425
            ..:.......|:...:|||::|||| .....||:|.||::|:|.|.:.:..|
Yeast   339 FKVRIEDPPRRKHMVFIGGAVLASIMADKDHMWLSKQEWQESGPSAMTKFGP 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 122/438 (28%)
ARP2NP_010255.1 ACTIN 4..387 CDD:214592 122/435 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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