DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP6

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_566861.1 Gene:ARP6 / 823150 AraportID:AT3G33520 Length:421 Species:Arabidopsis thaliana


Alignment Length:451 Identity:101/451 - (22%)
Similarity:188/451 - (41%) Gaps:80/451 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVV--------GIGAAPETNLDPETKTDNNATPNNADQRK 72
            :|.|.|...::.|...|..|...||:.:        .|..:|.|.|..|....:.|.....|:  
plant     5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKPLSSKKFIHPSPLTTLSDEIDLTSAAVRRPIDR-- 67

  Fly    73 FYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNN 137
                                   |.:.|.||..::..:.:.:::...|....:|.:||..::.:.
plant    68 -----------------------GYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSV 109

  Fly   138 REKLTELMFEKYNVPAFFLV-KNAVLAAFSSGR---------ATALVVDSGATHTSAVPVHEGYV 192
            :....||:||.:...:.::. ..:::..:.:.|         ..:||||.|.:.|.||||...:.
plant   110 QRTTDELVFEDFGFSSLYIAHPQSLVHLYEASRQPDSILSKTQCSLVVDCGFSFTHAVPVLHNFT 174

  Fly   193 LSQAVVKSPLGGDFLSRQCRQHLEKHGI----------DLSPVYKIASKDVVKE---RDNGRFTL 244
            |:.|:.:..|||...:...::.:....|          |........|.|::::   ..||...:
plant   175 LNHAIKRIDLGGKAFTNYLKELVSYRSINVMDETFLVDDAKEKLCFVSLDLLRDLRLARNGNTLI 239

  Fly   245 RK---LPENLTQSWQNYMLQLMMQDFQMNVLQ----VLENPFDERVAAQIPTVHYEFPNGYHQDF 302
            :.   ||:.:|.: :.|:.........:::.:    |:.:...||..|.:        |....|.
plant   240 KSTYVLPDGVTHT-KGYVKDPQAAKRFLSLSEKESVVVMDKVGERKKADM--------NKNEIDL 295

  Fly   303 GSERFKIAESLFDNAMLGAGQ--LAS---TSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNR 362
            .:|||.:.|:||..|.||..|  ||.   .::..|.:.::..|:.|:::|||:||.....|||..
plant   296 TNERFLVPETLFQPADLGMNQAGLAECIVRAINSCHSYLQPVLYQSIILTGGSTLFPQLKERLEG 360

  Fly   363 DLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            :|:...|.:..:|:.:....:   .|.|.|||:|||...|:.|.::..||||.|.::..|:
plant   361 ELRPLVPDHFDVKITTQEDPI---LGVWRGGSLLASSPDFESMCVTKAEYEELGSARCRRR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 101/451 (22%)
ARP6NP_566861.1 ACTIN 3..420 CDD:214592 101/451 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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