DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and ARP2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_189336.1 Gene:ARP2 / 822317 AraportID:AT3G27000 Length:389 Species:Arabidopsis thaliana


Alignment Length:423 Identity:109/423 - (25%)
Similarity:187/423 - (44%) Gaps:62/423 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVG--IGAAPETNLDPETKTDNNATPNNADQRKF 73
            |....:|.|.|...::.|:|.|:.|.:..|.|||  :....|:.::.:.|  :........:.:.
plant     2 DNKNVVVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLMEQQVK--DIVVGETCSELRH 64

  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNR 138
            .:|.||   |..|         |::.|||..|.|.|:|:.|.::..|....:|.::...|...||
plant    65 QLDINY---PVHN---------GIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPPLNPSKNR 117

  Fly   139 EKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLG 203
            ||:.|.||||||....|:...|||..::.|..|.||:|||...|..|||.:||.......:..:.
plant   118 EKMIETMFEKYNFAGVFIQIQAVLTLYAQGLLTGLVIDSGDGVTHVVPVVDGYSFPHLTKRMNVA 182

  Fly   204 GDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQ 268
            |        :|:..:.:||     ::.:.....:.....|:|::.|.|.....:|     .::.|
plant   183 G--------RHITAYLVDL-----LSRRGYAMNKTADFETVREIKEKLCYISYDY-----KRESQ 229

  Fly   269 MNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTS 328
            :.            :...|...:|..|:|.....|:|||:..|:||...::     |...:....
plant   230 LG------------LETTILVKNYTLPDGRVIKVGTERFQAPEALFTPELIDVEGDGMADMVFRC 282

  Fly   329 VGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLK---------MISANGSVE 384
            :...|.|.|:.|:..:|::||:|:..|.|.||.:::|.|. .:|.||         .:.......
plant   283 IQEMDIDNRMMLYQHIVLSGGSTMYPGLPSRLEKEIQDRY-LDTVLKGNKDGLKKLRLRIEDPPR 346

  Fly   385 RRFGAWIGGSILASI-GTFQQMWISSQEYEEAG 416
            |:...::||::||.| ....:.||:.::|.|.|
plant   347 RKHMVYLGGAVLAGIMKDAPEFWINREDYMEEG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 108/421 (26%)
ARP2NP_189336.1 ACTIN 4..387 CDD:214592 108/421 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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