DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and actr2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001025569.1 Gene:actr2 / 594957 XenbaseID:XB-GENE-488998 Length:394 Species:Xenopus tropicalis


Alignment Length:434 Identity:107/434 - (24%)
Similarity:181/434 - (41%) Gaps:81/434 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYV 80
            :|.|.|...::.|||..:.|:...|::||......|           |...|.:.:...|. :..
 Frog     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPVIRST-----------AKVGNIEIKDLMVG-DEA 61

  Fly    81 TVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREKLTEL 144
            :..||.:||...|::|::.|||..:.:.||.:. ..:..:.....:|.:|...|...||||:.|:
 Frog    62 SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRDCKILLTEPPMNPTKNREKIVEV 126

  Fly   145 MFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSR 209
            |||.|.....::...|||..::.|..|.:|||||...|...||:||:.|.....:..:.|..::|
 Frog   127 MFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITR 191

  Fly   210 Q------CRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQ 268
            .      .|.:...|..|..                   |:|.:.|.|  .:..|.:: ..|...
 Frog   192 YLIKLLLLRGYAFNHSADFE-------------------TVRMIKEKL--CYVGYNIE-QEQKLA 234

  Fly   269 MNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTS 328
            :....::|:              |..|:|.....|.|||:..|:||...::     |..:|...:
 Frog   235 LETTVLVES--------------YTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAELLFNT 285

  Fly   329 VGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVE--------- 384
            :...|.|.|...:..:|::||:|:..|.|.||.|:|:     ...|:.: ..|.||         
 Frog   286 IQAADIDTRPEFYKHIVLSGGSTMYPGLPSRLERELK-----QLYLERV-LKGDVEKLSKFKIRI 344

  Fly   385 -----RRFGAWIGGSILASI-GTFQQMWISSQEYEEAGKSQVER 422
                 |:...::||::||.| ......|::.|||:|.|...:|:
 Frog   345 EDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGTRVLEK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 107/434 (25%)
actr2NP_001025569.1 ACTIN 6..388 CDD:214592 106/432 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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