DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and si:ch211-241j12.3

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001025380.2 Gene:si:ch211-241j12.3 / 566552 ZFINID:ZDB-GENE-040724-72 Length:1721 Species:Danio rerio


Alignment Length:416 Identity:122/416 - (29%)
Similarity:202/416 - (48%) Gaps:59/416 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV--DTN 78
            :|.|.|...::.|:|.:|.|.|..|:|:|             :.......|:...|:.||  |..
Zfish  1357 IVLDSGSGLMKAGFADQDLPAAVFPTVIG-------------RPKYEEVMNSCVDRELYVGHDAQ 1408

  Fly    79 YVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKLTE 143
            ::   |..:.::..::.|::.|||..|.:..:|: .::.:.||.||||.:||:.|...||:::.|
Zfish  1409 HM---RGVLTLRYPIRHGVVSNWDEMEMLWTHAF-QLLSAAPEDHPVLLTEAALNPLQNRQRMVE 1469

  Fly   144 LMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLS 208
            ||||.::||..|:...||||.::|||.|.:|:|||...:.:|||.|||.|..||.:..|.|..::
Zfish  1470 LMFEAFSVPLTFVAVQAVLALYASGRTTGVVLDSGDGVSHSVPVFEGYCLPHAVQRLDLAGADVT 1534

  Fly   209 RQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVLQ 273
            .|.::.|.:.|:.|.   ..|..::|:|          :.|.......:|..::...:.:     
Zfish  1535 LQLQKLLLESGVCLR---TSAELEIVRE----------MKERCCFVSVDYEAEMKSSESE----- 1581

  Fly   274 VLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLGAG-----QLASTSVGMCD 333
                            :.|..|:|:.....|:||:..|.||...::|..     :....|:...|
Zfish  1582 ----------------IQYTLPDGHTVPLASQRFRAPEILFRPELIGRDHYGLHESVFRSILQSD 1630

  Fly   334 ADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILAS 398
            .|:|.|..|:::::||||||.|..|||..:::...|.:.. ..:..:...:|.|..|.||:.|||
Zfish  1631 LDLRRSFVGNILLSGGNTLLSGLAERLQLEVRAMVPVDLS-ACVRVSSPPDRDFSVWSGGAALAS 1694

  Fly   399 IGTFQQMWISSQEYEEAGKSQVERKC 424
            :...|..|||:.||||.|...|.|||
Zfish  1695 LPEQQSAWISAAEYEEFGPQIVFRKC 1720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 117/406 (29%)
si:ch211-241j12.3NP_001025380.2 None

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