DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Act88F

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_524367.1 Gene:Act88F / 41885 FlyBaseID:FBgn0000047 Length:376 Species:Drosophila melanogaster


Alignment Length:419 Identity:136/419 - (32%)
Similarity:218/419 - (52%) Gaps:52/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV 75
            |:.||||.|.|....:.|:|.:|:|:|..||:||             :..:........|:..||
  Fly     4 DDAGALVIDNGSGMCKAGFAGDDAPRAVFPSIVG-------------RPRHQGVMVGMGQKDSYV 55

  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREK 140
            . :.....|..:.::..::.|:|.|||..||:..:.:.|.::..||.||||.:||..|.:.||||
  Fly    56 G-DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

  Fly   141 LTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGD 205
            :|::|||.:|.||.::...|||:.::|||.|.:|:|||...:..||::||:.|..|:::..|.|.
  Fly   120 MTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFALPHAILRLDLAGR 184

  Fly   206 FLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMN 270
            .|:....:.|.:.|...:..   |.:::|          |.:.|.|.         .:..||:..
  Fly   185 DLTDYLMKILTERGYSFTTT---AEREIV----------RDIKEKLC---------YVALDFEQE 227

  Fly   271 VLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTSVG 330
            :.....:...|:        .||.|:|.....|:|||:..|:||..:.|     |..:....|:.
  Fly   228 MATAAASTSLEK--------SYELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETVYNSIM 284

  Fly   331 MCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSI 395
            .||.|:|..|:.:.|::||.|:..|..:|:.:::...|||..::|:|:   ..||::..||||||
  Fly   285 KCDVDIRKDLYANSVLSGGTTMYPGIADRMQKEITALAPSTIKIKIIA---PPERKYSVWIGGSI 346

  Fly   396 LASIGTFQQMWISSQEYEEAGKSQVERKC 424
            |||:.||||||||.|||:|:|...|.|||
  Fly   347 LASLSTFQQMWISKQEYDESGPGIVHRKC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 135/417 (32%)
Act88FNP_524367.1 PTZ00281 1..376 CDD:173506 136/419 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467829
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

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