DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and actr2a

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_021326108.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:399 Species:Danio rerio


Alignment Length:432 Identity:105/432 - (24%)
Similarity:181/432 - (41%) Gaps:72/432 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNAD----QRKFYVD 76
            :|.|.|...::.|||..:.|:...|::||......|           |...|.:    :|...:.
Zfish     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRST-----------AKVGNIEIKDYRRMDLMV 62

  Fly    77 TNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREK 140
            .:..:..||.:||...|::|::.|||..:.:.||.:. ..:..:.....:|.:|...|...||||
Zfish    63 GDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREK 127

  Fly   141 LTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGD 205
            :.|:|||.|.....::...|||..::.|..|.:|||||...|...||:||:.|.....:..:.|.
Zfish   128 IIEVMFETYQFSGVYIAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGR 192

  Fly   206 FLSRQ------CRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMM 264
            .::|.      .|.:...|..|..                   |:|.:.|.|  .:..|.:: ..
Zfish   193 DITRYLIKLLLLRGYAFNHSADFE-------------------TVRMMKEKL--CYVGYNIE-QE 235

  Fly   265 QDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQL 324
            |...:....::|:              |..|:|.....|.|||:..|:||...::     |..:|
Zfish   236 QKLALETTVLVES--------------YTLPDGRVIKVGGERFEAPEALFQPHLINVEGVGVAEL 286

  Fly   325 ASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQ-------LRAPSNTRLKM-ISANG 381
            ...::...|.|.|...:..:|::||:|:..|.|.||.|:|:       |:...:...|. |....
Zfish   287 LFNTIQAADIDTRAEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVDKLSKFKIRIED 351

  Fly   382 SVERRFGAWIGGSILASI-GTFQQMWISSQEYEEAGKSQVER 422
            ...|:...::||::||.| ......|::.:||:|.|...:|:
Zfish   352 PPRRKHMVFLGGAVLADIMKDKDNFWMTREEYQEKGTRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 105/432 (24%)
actr2aXP_021326108.1 ACTIN 6..393 CDD:214592 104/430 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.