DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and actr3

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001003944.1 Gene:actr3 / 406250 ZFINID:ZDB-GENE-040428-2 Length:418 Species:Danio rerio


Alignment Length:436 Identity:113/436 - (25%)
Similarity:188/436 - (43%) Gaps:68/436 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNY 79
            |.|.|.|....::|||....|:..|||.:.|..:.:.....:.:     .....|...||:....
Zfish     7 ACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRR-----MMKGVDDLDFYIGDEA 66

  Fly    80 VTVPRSNMEVQTY-----MKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNRE 139
            :..|       ||     ::.|::::|||.|:.::......:::|||.|..|.:|...|...|||
Zfish    67 IDKP-------TYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENRE 124

  Fly   140 KLTELMFEKYNVPAFFLVKNAVLAAFSSGRA--------TALVVDSGATHTSAVPVHEGYVLSQA 196
            ...|:|||.:|||..::...||||..:|..:        |..|:|||...|..:||.||||:...
Zfish   125 YTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSC 189

  Fly   197 VVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYML- 260
            :...|:.|..::...:|.|.:..:.:.|...:.:...||||      ...:..:|.:.:..|.. 
Zfish   190 IKHIPIAGRDITYFTQQLLREREVGIPPEQSLETAKAVKER------FSYVCPDLVKEFSKYDTD 248

  Fly   261 --QLMMQDFQMNVLQVLENPFD---ERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLG 320
              :.:.|...:|.:...|...|   ||........|.||.|   .||.....::.:.:..|    
Zfish   249 GSKWIKQYTGINTISKKEFTIDVGYERFLGPEIFFHPEFAN---PDFTQPISEVVDEVIQN---- 306

  Fly   321 AGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVE- 384
                       |..|||..|:.::|::||:|:.:.|..||.|||:....:..:|....:.|.:: 
Zfish   307 -----------CPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGKLKP 360

  Fly   385 ------------RRFGAWIGGSILASIGTFQQMWISSQEYEEAGKS 418
                        :|:..|.|||:|||...|.|:..:.::|||.|.|
Zfish   361 KPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKKDYEEIGPS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 111/432 (26%)
actr3NP_001003944.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 113/436 (26%)

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