DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and actl6a

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_989337.1 Gene:actl6a / 394962 XenbaseID:XB-GENE-491948 Length:429 Species:Xenopus tropicalis


Alignment Length:435 Identity:245/435 - (56%)
Similarity:317/435 - (72%) Gaps:16/435 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGGTMLYGGDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATP 65
            ||||  :|||||:||||||.|.:|:|.|||.||.||.:.|:.:|:....|   |..|..:.:...
 Frog     1 MSGG--VYGGDEVGALVFDIGSYSVRAGYAGEDCPKVDFPTTIGVVIDRE---DGSTPMETDGDQ 60

  Fly    66 NNADQRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEA 130
            |.:....:|:|||.:.|||.|||..:.:|:|||::||.|:.:||:.|...|:||...||||.|||
 Frog    61 NKSRSPTYYIDTNSLRVPRENMEAFSPLKNGMIEDWDSFQAIIDHTYKTHIKSETNLHPVLMSEA 125

  Fly   131 SWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQ 195
            :||.|..||||||||||.||:|||||.|.|||.||::||:|.|::|||:|||:|:|||:||||.|
 Frog   126 AWNTRVKREKLTELMFEHYNIPAFFLCKTAVLTAFANGRSTGLILDSGSTHTTAIPVHDGYVLQQ 190

  Fly   196 AVVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLR-KLPENLTQSWQNYM 259
            .:|||||.|||::.|||:..::..:||.|.|.||||:.|:|.....:..: |||: :|:||.|||
 Frog   191 GIVKSPLAGDFITMQCRELFQEMTVDLIPPYMIASKEAVREGATPNWKRKEKLPQ-VTRSWHNYM 254

  Fly   260 LQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFD--------- 315
            ...::||||.:||||.::.:||:||||:|||||||||||:.|||:||.||.|.|||         
 Frog   255 CNCVIQDFQASVLQVSDSTYDEQVAAQMPTVHYEFPNGYNCDFGAERLKIPEGLFDPSNVKGLSG 319

  Fly   316 NAMLGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISAN 380
            |.|||...:.:|||||||.|:|..|:|||:|.|||||||||.:||.|:|..:.|.:.|||:|:.|
 Frog   320 NTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLLQGFTDRLTRELSQKTPPSMRLKLIANN 384

  Fly   381 GSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERKCP 425
            .:|||||.:|||||||||:|||||||||.|||||.||..||||||
 Frog   385 TTVERRFSSWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 234/421 (56%)
actl6aNP_989337.1 Actin 11..429 CDD:306521 234/421 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 485 1.000 Domainoid score I398
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H55811
Inparanoid 1 1.050 488 1.000 Inparanoid score I1400
OMA 1 1.010 - - QHG55702
OrthoDB 1 1.010 - - D300517at33208
OrthoFinder 1 1.000 - - FOG0001878
OrthoInspector 1 1.000 - - oto103767
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1579
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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