DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Arp53D

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_477037.2 Gene:Arp53D / 36879 FlyBaseID:FBgn0011743 Length:411 Species:Drosophila melanogaster


Alignment Length:416 Identity:135/416 - (32%)
Similarity:211/416 - (50%) Gaps:59/416 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 ALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNY 79
            |:|.|.|....:.|::.||:|:|..||:||........||   ....::....|..||       
  Fly    48 AVVIDNGSGVCKAGFSPEDTPRAVFPSIVGRPRHLNVLLD---SVIGDSVIGEAAARK------- 102

  Fly    80 VTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKLTEL 144
                |..:.::..::.||:.|||..|.|..:.| .:::::|...|.|.:||..|.:.||||:||:
  Fly   103 ----RGILTLKYPIEHGMVKNWDEMEMVWQHTY-ELLRADPMDLPALLTEAPLNPKKNREKMTEI 162

  Fly   145 MFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGG-DFLS 208
            |||.:.||||::...|||:.:::||...:|||||...|..||::||:.|..|.|:..|.| |...
  Fly   163 MFEHFQVPAFYVAVQAVLSLYATGRTVGIVVDSGDGVTHTVPIYEGFALPHACVRVDLAGRDLTD 227

  Fly   209 RQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVLQ 273
            ..|:..||: |:.:.   ..|.:::|:|          :.|.|.....||..::.:.        
  Fly   228 YLCKLLLER-GVTMG---TSAEREIVRE----------IKEKLCYVSMNYAKEMDLH-------- 270

  Fly   274 VLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTSVGMCD 333
                       .::.|  ||.|:|.....|.|||:..|:||..::|     |..:....|:..||
  Fly   271 -----------GKVET--YELPDGQKIVLGCERFRCPEALFQPSLLGQEVMGIHEATHHSITNCD 322

  Fly   334 ADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILAS 398
            .|:|..::.::|::||.|:.:....|..:||...||.:.|:|:   |.|.:|||..|.|||:|||
  Fly   323 MDLRKDMYANIVLSGGTTMFRNIEHRFLQDLTEMAPPSIRIKV---NASPDRRFSVWTGGSVLAS 384

  Fly   399 IGTFQQMWISSQEYEEAGKSQVERKC 424
            :.:||.|||.|.||||.|.:.|.|||
  Fly   385 LTSFQNMWIDSLEYEEVGSAIVHRKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 135/416 (32%)
Arp53DNP_477037.2 ACTIN 46..411 CDD:214592 135/416 (32%)
NBD_sugar-kinase_HSP70_actin 47..411 CDD:302596 135/416 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467774
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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