DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and Actr8

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001296388.1 Gene:Actr8 / 361107 RGDID:1311878 Length:624 Species:Rattus norvegicus


Alignment Length:578 Identity:120/578 - (20%)
Similarity:202/578 - (34%) Gaps:191/578 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVV--------------------GIGAAPETN-------- 52
            :|..||..:||:|.|.:..| |.||.|:                    |:. .||:|        
  Rat    49 VVVHPGSTTLRIGRATDTLP-ASIPHVIARRHKQQGQPLYKDNWLLREGLN-KPESNEQRQNGLK 111

  Fly    53 -------------------LDPE-TKTDN-------------NATPNNADQRKFYV--DTNYVTV 82
                               :.|| |::.|             |...|.:.|.::.|  :..||. 
  Rat   112 MVDQAIWSKKMSNGTRRIPVSPEQTRSYNKQMRPAILDHCSGNKWTNTSHQPEYLVGEEALYVN- 175

  Fly    83 PRSNMEVQTYMKDGMID-------NWDLFEKVIDYAYANVIQSEPE--------YHPVLFSEASW 132
            |.....:...::.|.::       :.......|:..:::.||...|        |..:|.....:
  Rat   176 PLDCYNIHWPIRRGQLNIHPGPGGSLTAVLADIEVIWSHAIQKYLEIPLKDLKYYRCILLIPDIY 240

  Fly   133 NVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAV 197
            |.::.:| |..::..|.......:.:.:|.|.|.||.::..|||.|...||...|.:|.......
  Rat   241 NKQHVKE-LVHMILMKMGFAGIVVHQESVCATFGSGLSSTCVVDVGDQKTSVCCVEDGVSHRNTR 304

  Fly   198 VKSPLGGDFLS--------------RQCR----------QHLEKHGIDLSPVYKIASKDVVKERD 238
            :....||..:|              |:|:          |||::....|       .:|:...:|
  Rat   305 LCLAYGGSDVSRCFYWLMQRAGFPYRECQLANKMDCLLLQHLKETFCHL-------DQDISGLQD 362

  Fly   239 NGRFTLRKLPENLTQSWQ----NYMLQLMMQDF----------QMNVLQVL-----ENPFDE--- 281
            : .|.:|. |::....:|    :..||..|..|          :|..||..     |:|.||   
  Rat   363 H-EFQIRH-PDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYL 425

  Fly   282 ----------------RVAAQIPTVHYE---------FPNGYHQ---DFGSER------------ 306
                            |.:|..| :.:|         .|...|.   |..|.:            
  Rat   426 LATQSKQEQSAKATADRKSASKP-IGFEGDLRGQSSDLPERLHSQEVDLASSQGDCLMAGNESEE 489

  Fly   307 -------FKIAESLFDNAMLGAGQLASTSVGMCDA-DVRLSLFGSVVVTGGNTLLQGFPERL-NR 362
                   .|.|.|||:...||..:....||..|.: |.:..::.|::|.||..:.....|.| :|
  Rat   490 ALTALMSRKTAISLFEGKALGLDKAILHSVDCCSSDDTKKKMYSSILVVGGGLMFHKAQEFLQHR 554

  Fly   363 DLQLRAPSNTRL----KMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAG 416
            .|....||..|:    .:|:....::.|..:|.||::||.:.|.|::||..:|::..|
  Rat   555 ILNKMPPSFRRIIENVDVITRPKDMDPRLISWKGGAVLACLDTTQELWIYQREWQRFG 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 120/578 (21%)
Actr8NP_001296388.1 NBD_sugar-kinase_HSP70_actin 162..619 CDD:418402 98/463 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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