DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Arp10

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001285452.1 Gene:Arp10 / 32969 FlyBaseID:FBgn0031050 Length:378 Species:Drosophila melanogaster


Alignment Length:437 Identity:92/437 - (21%)
Similarity:155/437 - (35%) Gaps:132/437 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYV 80
            :|.|.|....::|:|.|..|:..:|:.|.:                  |.....:|.|..||   
  Fly    14 IVLDIGTAYTKLGFAAEAYPRKIMPTEVVM------------------TTTGIRKRLFDYDT--- 57

  Fly    81 TVPRSNMEVQTYMKDGMIDNWDLFEKVIDYA----YANVIQSEPEYHPVLFSEASWNVRNN---R 138
              |.                 :|:::::|:.    :.:::.|..|...||..    ||..:   |
  Fly    58 --PE-----------------ELYDQLVDFLQTIFFKHLLVSPKERKFVLVE----NVFGSTVLR 99

  Fly   139 EKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLG 203
            |.|..::|..::|.:...|...::|..:....||||||.|.:.||.:||..|..:..|......|
  Fly   100 ETLARVLFVHFDVSSVLFVPVHLIALSTLAVPTALVVDVGYSETSVMPVFSGVQIMAAFKDQSYG 164

  Fly   204 GDFLSRQCRQHLEKHGIDLSPVYKIASKDV------------VKERDNGRFTLRKLPENLTQSWQ 256
            |..:..:.::.|.:.|:..|.:.:...:|:            .|.|.||                
  Fly   165 GSAIHAEIKRQLVESGVKESLLTESVLEDIKVRTCFVTTMERAKARANG---------------- 213

  Fly   257 NYMLQLMMQDFQMNVLQVLENPFDERVAAQIPTVHY---------EFPNGYHQDFGSERFKIAES 312
                                   ||......|.|.|         :.|       |..|....|.
  Fly   214 -----------------------DENQPTPAPDVDYIVSDNDAVIQVP-------GLLRESAYEI 248

  Fly   313 LFD--NAMLGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQ---------- 365
            :|:  |.......|...|:..|..|||.:|..||.:.||.:::||...||.::||          
  Fly   249 MFEASNERDSLPHLILRSILDCTLDVRRALVESVFLVGGGSMVQGLLARLRQELQHLLTEDPFYA 313

  Fly   366 LRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEY 412
            .|.....:.|..:|.|  ::.|.||:||::..:....|...:..:.|
  Fly   314 ERFHGELQFKFFNAVG--KQNFTAWLGGALCGATDLIQTRSLVKETY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 92/437 (21%)
Arp10NP_001285452.1 ACTIN 11..340 CDD:214592 89/417 (21%)
NBD_sugar-kinase_HSP70_actin 12..367 CDD:302596 92/437 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467820
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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