DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Arp2

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001259621.1 Gene:Arp2 / 32623 FlyBaseID:FBgn0011742 Length:399 Species:Drosophila melanogaster


Alignment Length:435 Identity:115/435 - (26%)
Similarity:189/435 - (43%) Gaps:78/435 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNL--DPETK---TDNNATPNNADQRKFYV 75
            :|.|.|...::.|||..:.|....||:||.......|.  |.|.|   .|:....:.|.|.    
  Fly     9 IVCDNGTGFVKCGYAGSNFPTHIFPSMVGRPMIRAVNKIGDIEVKDLHVDDLMVGDEASQL---- 69

  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNRE 139
                    ||.:||...|::|::.|||....|.||.:. ..:..:|....:|.:|...|...|||
  Fly    70 --------RSLLEVSYPMENGVVRNWDDMCHVWDYTFGPKKMDIDPTNTKILLTEPPMNPTKNRE 126

  Fly   140 KLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGG 204
            |:.|:|||||...:.::...|||..::.|..:.:|:|||...|...||:|.:.|.....:..:.|
  Fly   127 KMIEVMFEKYGFDSAYIAIQAVLTLYAQGLISGVVIDSGDGVTHICPVYEEFALPHLTRRLDIAG 191

  Fly   205 DFLSRQ------CRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLM 263
            ..::|.      .|.:...|..|...|      .::||:                      |..:
  Fly   192 RDITRYLIKLLLLRGYAFNHSADFETV------RIMKEK----------------------LCYI 228

  Fly   264 MQDFQMNVLQVLENPFDERVAAQIPTV--HYEFPNGYHQDFGSERFKIAESLFDNAML-----GA 321
            ..|.:|          ::|:|.:...:  .|..|:|.....|.|||:..|:||...::     |.
  Fly   229 GYDIEM----------EQRLALETTVLVESYTLPDGRVIKVGGERFEAPEALFQPHLINVEGPGI 283

  Fly   322 GQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDL-QL---RAPSNTRLKMISANGS 382
            .:||..::...|.|:|..|:..:|::||:|:..|.|.||.|:: ||   |...|...|:......
  Fly   284 AELAFNTIQAADIDIRPELYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKNDTEKLAKFKIR 348

  Fly   383 VE----RRFGAWIGGSILASIGTFQQ-MWISSQEYEEAGKSQVER 422
            :|    |:...:|||::||.:...:. .|:|.|||:|.|...:::
  Fly   349 IEDPPRRKDMVFIGGAVLAEVTKDRDGFWMSKQEYQEQGLKVLQK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 114/427 (27%)
Arp2NP_001259621.1 ASKHA_NBD_Arp2 7..393 CDD:466821 115/433 (27%)

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