DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and Arp6

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:453 Identity:101/453 - (22%)
Similarity:184/453 - (40%) Gaps:105/453 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTN-- 78
            :|.|.|.|:.:||.|.:|.|.. :|:.:         :..:::.......|..|:.:   ||:  
  Fly     6 VVLDNGAHTAKVGLANQDEPHV-VPNCI---------MKAKSERRRAFVGNQIDECR---DTSAL 57

  Fly    79 -YVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREKL 141
             |:..          .:.|.:.||...:.|.||.:: :.|....|...::.:|...|.::.:|..
  Fly    58 YYILA----------FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEAT 112

  Fly   142 TELMFEKYNVPAFFLVKNAVLAAF-----SSGRAT-----ALVVDSGATHTSAVPVHEGYVLSQA 196
            .|::||:|.|...:....|.||||     |..|.|     .:::|.|.:.|..||...|..:.|.
  Fly   113 LEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQG 177

  Fly   197 VVKSPLGGDFLSRQCRQ-----HLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQ 256
            :.:..:||..|:.|.::     ||  :.:|.|.|.....:||.                      
  Fly   178 IRRIDMGGKALTNQLKELISYRHL--NVMDESHVVNQIKEDVC---------------------- 218

  Fly   257 NYMLQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPN------GYHQDFG------------ 303
                 .:.:||:    |.::..:.|....:: ||.|..|:      ||.:..|            
  Fly   219 -----FVAEDFK----QAMQVHYSEEKRREV-TVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMV 273

  Fly   304 ---SERFKIAESLFDNAMLGAGQL-----ASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERL 360
               :|||.:.|.||:.:.:|..|:     .:..:..|..:....|..::::.||:....||..||
  Fly   274 SLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRL 338

  Fly   361 NRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            .|||:...|.:..:.:|.....|  |: ||.||..:|:...|::...:..:|||.|...:.::
  Fly   339 KRDLRALVPDDLEVSLICPEDPV--RY-AWYGGKEVATSPNFEEFVYTQDDYEEYGFQGINQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 100/444 (23%)
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 100/444 (23%)

Return to query results.
Submit another query.