DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Arp6

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:453 Identity:101/453 - (22%)
Similarity:184/453 - (40%) Gaps:105/453 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTN-- 78
            :|.|.|.|:.:||.|.:|.|.. :|:.:         :..:::.......|..|:.:   ||:  
  Fly     6 VVLDNGAHTAKVGLANQDEPHV-VPNCI---------MKAKSERRRAFVGNQIDECR---DTSAL 57

  Fly    79 -YVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREKL 141
             |:..          .:.|.:.||...:.|.||.:: :.|....|...::.:|...|.::.:|..
  Fly    58 YYILA----------FQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEAT 112

  Fly   142 TELMFEKYNVPAFFLVKNAVLAAF-----SSGRAT-----ALVVDSGATHTSAVPVHEGYVLSQA 196
            .|::||:|.|...:....|.||||     |..|.|     .:::|.|.:.|..||...|..:.|.
  Fly   113 LEILFEEYKVDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQG 177

  Fly   197 VVKSPLGGDFLSRQCRQ-----HLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQ 256
            :.:..:||..|:.|.::     ||  :.:|.|.|.....:||.                      
  Fly   178 IRRIDMGGKALTNQLKELISYRHL--NVMDESHVVNQIKEDVC---------------------- 218

  Fly   257 NYMLQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPN------GYHQDFG------------ 303
                 .:.:||:    |.::..:.|....:: ||.|..|:      ||.:..|            
  Fly   219 -----FVAEDFK----QAMQVHYSEEKRREV-TVDYVLPDFTTVKRGYVRVPGKPREDEEQQQMV 273

  Fly   304 ---SERFKIAESLFDNAMLGAGQL-----ASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERL 360
               :|||.:.|.||:.:.:|..|:     .:..:..|..:....|..::::.||:....||..||
  Fly   274 SLCNERFTVPELLFNPSDIGVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRL 338

  Fly   361 NRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            .|||:...|.:..:.:|.....|  |: ||.||..:|:...|::...:..:|||.|...:.::
  Fly   339 KRDLRALVPDDLEVSLICPEDPV--RY-AWYGGKEVATSPNFEEFVYTQDDYEEYGFQGINQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 101/453 (22%)
Arp6NP_511165.1 ACTIN 3..398 CDD:214592 101/451 (22%)
COG5277 6..391 CDD:227602 100/444 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467827
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11937
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.040

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