DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actr1b

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001034117.2 Gene:Actr1b / 316333 RGDID:1307380 Length:376 Species:Rattus norvegicus


Alignment Length:421 Identity:127/421 - (30%)
Similarity:207/421 - (49%) Gaps:71/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVG-------IGAAPETNLDPETKTDNNATPNNADQRKF 73
            :|.|.|...::.|:|.:..||...|:.||       :..|.|.:|....|.:.:           
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH----------- 65

  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNN 137
                      |..:.::..|:.|::.:|:..|::..|.|: :.:|:..|.||||.:||..|...|
  Rat    66 ----------RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

  Fly   138 REKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPL 202
            |||..|:.||.:||||.|:...|||:.:::||.|.:|:|||...|.|||::||:.:..::::..:
  Rat   121 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDI 185

  Fly   203 GGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDF 267
            .|..:||..|..|.|.|.|.....:......:|||                              
  Rat   186 AGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKER------------------------------ 220

  Fly   268 QMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLAST 327
               ...:..||..:. |.:...|.|..|:|...|.|..||:..|.||...::     |..::.:.
  Rat   221 ---ACYLSINPQKDE-ALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAF 281

  Fly   328 SVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIG 392
            ::...|.|:|.:||.::|::||:||.:||.:||..:::..||.:.::| |||  ..||.:..|||
  Rat   282 AIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIK-ISA--PQERLYSTWIG 343

  Fly   393 GSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            ||||||:.||::||:|.:||||.|...:.||
  Rat   344 GSILASLDTFKKMWVSKKEYEEDGSRAIHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 127/421 (30%)
Actr1bNP_001034117.2 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 127/421 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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