DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actr1a

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_006231532.1 Gene:Actr1a / 294010 RGDID:1307025 Length:396 Species:Rattus norvegicus


Alignment Length:424 Identity:128/424 - (30%)
Similarity:217/424 - (51%) Gaps:57/424 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVG-------IGAAPETN--LDPETKTDNNATPNNADQR 71
            :|.|.|...::.|:|.:..||...|:.||       :..|.|.:  :.|:.:...:.|...:..:
  Rat    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHVRVMAGALEGDIFIGPKAEVIPSPTEEASGLQ 76

  Fly    72 KFYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVR 135
            :.|:.|   |..|..:.::..|:.|::.:|:..|::..|.|: :.:|:..|.||||.:||..|.|
  Rat    77 RAYLST---TEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPR 138

  Fly   136 NNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKS 200
            .|||:..|:.||.:||||.|:...|||:.:::||.|.:|:|||...|.|||::||:.:..::::.
  Rat   139 KNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRI 203

  Fly   201 PLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQ 265
            .:.|..:||..|.:|.|.|.|.....:......:|||                            
  Rat   204 DIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIKER---------------------------- 240

  Fly   266 DFQMNVLQVLENP-FDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQL 324
                 ...:..|| .||.:..:  ...|..|:|...:.|..||:..|.||...::     |..::
  Rat   241 -----ACYLSINPQKDETLETE--KAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIHEV 298

  Fly   325 ASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGA 389
            ...::...|.|:|.:||.::|::||:||.:||.:||..:::..||.:.::: |||  ..||.:..
  Rat   299 LVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIR-ISA--PQERLYST 360

  Fly   390 WIGGSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            |||||||||:.||::||:|.:||||.|...:.||
  Rat   361 WIGGSILASLDTFKKMWVSKKEYEEDGARSIHRK 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 128/424 (30%)
Actr1aXP_006231532.1 NBD_sugar-kinase_HSP70_actin 5..396 CDD:418402 128/424 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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