DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actl9b

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001013915.1 Gene:Actl9b / 292516 RGDID:1359476 Length:411 Species:Rattus norvegicus


Alignment Length:422 Identity:106/422 - (25%)
Similarity:189/422 - (44%) Gaps:57/422 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 GGDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKF 73
            |..::..:|.|.|....::|:|.:..|...:.::||        ..|:.:|       ..:|.|.
  Rat    40 GTTKMSGVVIDMGTGICKMGFAGQTRPTYIVRNIVG--------CQPKRRT-------TMEQPKM 89

  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNR 138
            .:........|..:.:...:::|::.:|:..|.:..:...|.::.:.:.||:||::..:|..:||
  Rat    90 EMFIGEAAHARPELTLMHPVRNGIVVDWEAAEFIWRHILENDLRLDTQDHPLLFTDPPFNPASNR 154

  Fly   139 EKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLG 203
            |||.|:.||..:.||.::...:||:.:::||...||||:|...:..|||.:||.|...:.:..|.
  Rat   155 EKLVEVAFESLHSPAIYVASQSVLSVYANGRVNGLVVDTGHGVSYTVPVFQGYNLPSGIQRMDLA 219

  Fly   204 GDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQ 268
            |.:|::...:.:            :.|...||:.|....      ||:.|.:....|     |||
  Rat   220 GHYLTKFLAEKI------------LRSSFAVKKEDMDTM------ENIKQQYCYVAL-----DFQ 261

  Fly   269 MNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLF------DNAMLGAGQLAST 327
            ..     :...||:....:     :.|:|.....|.|.|:..|.||      ..:.||...:...
  Rat   262 KE-----QGRPDEKFRRCL-----KLPDGQMITVGKELFQCPELLFHPPDTSGPSSLGLPSMVEH 316

  Fly   328 SVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIG 392
            |:.....::|..:..:|::.||::|..||..|...:|..|......:.:::   ...|....|||
  Rat   317 SLSTVPQELRADMEQNVLLCGGSSLFTGFEGRFKTELLRRLGPEAHVVVVA---QANRNLSVWIG 378

  Fly   393 GSILASIGTFQQMWISSQEYEEAGKSQVERKC 424
            ||||||:..||..|:..::|||.|...|.|||
  Rat   379 GSILASLCAFQTRWVLREQYEEHGPDIVLRKC 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 105/418 (25%)
Actl9bNP_001013915.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
NBD_sugar-kinase_HSP70_actin 45..410 CDD:302596 103/415 (25%)
Actin 47..411 CDD:278451 105/415 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.910

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