DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actr2

DIOPT Version :10

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001009268.1 Gene:Actr2 / 289820 RGDID:1310826 Length:394 Species:Rattus norvegicus


Alignment Length:434 Identity:108/434 - (24%)
Similarity:182/434 - (41%) Gaps:81/434 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYV 80
            :|.|.|...::.|||..:.|:...|::||......|     ||..|       .:.|..:..:..
  Rat     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRST-----TKVGN-------IEIKDLMVGDEA 61

  Fly    81 TVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREKLTEL 144
            :..||.:||...|::|::.|||..:.:.||.:. ..:..:.....:|.:|...|...||||:.|:
  Rat    62 SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRSCKILLTEPPMNPTKNREKIVEV 126

  Fly   145 MFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSR 209
            |||.|.....::...|||..::.|..|.:|||||...|...||:||:.|.....:..:.|..::|
  Rat   127 MFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITR 191

  Fly   210 Q------CRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQ 268
            .      .|.:...|..|..                   |:|.:.|.|  .:..|.:: ..|...
  Rat   192 YLIKLLLLRGYAFNHSADFE-------------------TVRMIKEKL--CYVGYNIE-QEQKLA 234

  Fly   269 MNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTS 328
            :....::|:              |..|:|.....|.|||:..|:||...::     |..:|...:
  Rat   235 LETTVLVES--------------YTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNT 285

  Fly   329 VGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVE--------- 384
            :...|.|.|...:..:|::||:|:..|.|.||.|:|:     ...|:.: ..|.||         
  Rat   286 IQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELK-----QLYLERV-LKGDVEKLSKFKIRI 344

  Fly   385 -----RRFGAWIGGSILASI-GTFQQMWISSQEYEEAGKSQVER 422
                 |:...::||::||.| ......|::.|||:|.|...:|:
  Rat   345 EDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 ASKHA_NBD_Arp4_ACTL6-like 10..416 CDD:466846 106/426 (25%)
Actr2NP_001009268.1 ASKHA_NBD_Arp2 7..388 CDD:466821 107/432 (25%)

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