DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and Actr2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_017454617.1 Gene:Actr2 / 289820 RGDID:1310826 Length:399 Species:Rattus norvegicus


Alignment Length:434 Identity:110/434 - (25%)
Similarity:181/434 - (41%) Gaps:76/434 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYV 80
            :|.|.|...::.|||..:.|:...|::||......|     ||..|....||........|.  .
  Rat     9 VVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRST-----TKVGNIEIKNNKKMDLMVGDE--A 66

  Fly    81 TVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNNREKLTEL 144
            :..||.:||...|::|::.|||..:.:.||.:. ..:..:.....:|.:|...|...||||:.|:
  Rat    67 SELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEKLNIDTRSCKILLTEPPMNPTKNREKIVEV 131

  Fly   145 MFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSR 209
            |||.|.....::...|||..::.|..|.:|||||...|...||:||:.|.....:..:.|..::|
  Rat   132 MFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITR 196

  Fly   210 Q------CRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQ 268
            .      .|.:...|..|..                   |:|.:.|.|  .:..|.:: ..|...
  Rat   197 YLIKLLLLRGYAFNHSADFE-------------------TVRMIKEKL--CYVGYNIE-QEQKLA 239

  Fly   269 MNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLASTS 328
            :....::|:              |..|:|.....|.|||:..|:||...::     |..:|...:
  Rat   240 LETTVLVES--------------YTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNT 290

  Fly   329 VGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVE--------- 384
            :...|.|.|...:..:|::||:|:..|.|.||.|:|:     ...|:.: ..|.||         
  Rat   291 IQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELK-----QLYLERV-LKGDVEKLSKFKIRI 349

  Fly   385 -----RRFGAWIGGSILASI-GTFQQMWISSQEYEEAGKSQVER 422
                 |:...::||::||.| ......|::.|||:|.|...:|:
  Rat   350 EDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 110/434 (25%)
Actr2XP_017454617.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.