DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actl6b

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:XP_006249182.1 Gene:Actl6b / 288563 RGDID:1307763 Length:444 Species:Rattus norvegicus


Alignment Length:454 Identity:244/454 - (53%)
Similarity:322/454 - (70%) Gaps:39/454 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSGGTMLYGGDEIGALVFDPGHHSLRVGYAQEDSPK------------------AEIPSVVGIGA 47
            ||||  :|||||:||||||.|..|:|.|||.||.||                  |:.|:.||:.|
  Rat     1 MSGG--VYGGDEVGALVFDIGSFSVRAGYAGEDCPKVSLPVPSPYPRGSDTLCQADFPTTVGLLA 63

  Fly    48 APE-TNLDPETKTDNNATPNNADQRKFYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYA 111
            |.| ..|:.|.:.:...       :.|::|||.:.|||...||.:.:|:|||::|:.|..::|:.
  Rat    64 AEEGGGLELEGEKEKKG-------KIFHIDTNALHVPRDGAEVMSPLKNGMIEDWECFRAILDHT 121

  Fly   112 YANVIQSEPEYHPVLFSEASWNVRNNREKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVD 176
            |:..::|||..||||.|||.||.|..||||||||||:||:|||||.|.|||.||::||:|.||:|
  Rat   122 YSKHVKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRSTGLVLD 186

  Fly   177 SGATHTSAVPVHEGYVLSQAVVKSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGR 241
            ||||||:|:|||:||||.|.:|||||.|||:|.|||:..::..||:.|.|.||:|:.|:|.....
  Rat   187 SGATHTTAIPVHDGYVLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPN 251

  Fly   242 FTLR-KLPENLTQSWQNYMLQLMMQDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSE 305
            :..: |||: :::||.|||...::||||.:||||.::|:||:||||:||||||.||||:.|:|:|
  Rat   252 WKKKEKLPQ-VSKSWHNYMCNEVIQDFQASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAE 315

  Fly   306 RFKIAESLFD---------NAMLGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLN 361
            |.:|.|.|||         |.|||.|.:.:||:||||.|:|..|:|||:|||||||||||.:|||
  Rat   316 RLRIPEGLFDPSNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLN 380

  Fly   362 RDLQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQVERKCP 425
            |:|..:.|.:.|||:|::|.::||:|..|||||||||:|||||||||.|||||.||..||||||
  Rat   381 RELSQKTPPSMRLKLIASNSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERKCP 444

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 233/440 (53%)
Actl6bXP_006249182.1 Actin 11..444 CDD:394979 233/440 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 482 1.000 Domainoid score I391
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 493 1.000 Inparanoid score I1346
OMA 1 1.010 - - QHG55702
OrthoDB 1 1.010 - - D300517at33208
OrthoFinder 1 1.000 - - FOG0001878
OrthoInspector 1 1.000 - - otm45439
orthoMCL 1 0.900 - - OOG6_102754
Panther 1 1.100 - - LDO PTHR11937
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1579
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.840

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