DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and alp5

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_595820.1 Gene:alp5 / 2541318 PomBaseID:SPBP23A10.08 Length:433 Species:Schizosaccharomyces pombe


Alignment Length:454 Identity:140/454 - (30%)
Similarity:221/454 - (48%) Gaps:64/454 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 YGGDEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRK 72
            |||||:.|:|.|||....|:|::.||.||..:||..|                     ..:|.|:
pombe     6 YGGDEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCG---------------------EFSDGRR 49

  Fly    73 FYVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNN 137
            .:.: .|:......||::..:::|.::|||:...:..|.....:::.|..||:|.:|...|...|
pombe    50 LFGE-EYIYKSNPGMEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPEN 113

  Fly   138 REKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPL 202
            |.|..|.|||....||.:|.|....|||:||:.||.:||.||..:|...:::|:||.:.......
pombe   114 RVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVLQKGYQVQHF 178

  Fly   203 GGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDF 267
            .|:.::....|.|.....::.|.|.:.||:.|:........||  |.:.|.|:..:.:|.:..::
pombe   179 SGNAINDILAQTLRDKNFEVMPKYLVKSKNPVEIGQPANCELR--PRDTTDSYHQFQVQRVYDEW 241

  Fly   268 QMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLF------------------ 314
            :.....:.:.||.....  |....:|||:|....||:||::|.|.||                  
pombe   242 KEECALISDVPFSSETT--IAESEFEFPDGSRMMFGAERYQIPEHLFVPGSDEEMNEEPSKPIEQ 304

  Fly   315 ----------------DNAMLGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRD 363
                            .:.:||..||....:..||.|:|.||..:|:|.||.:|:|||..||..:
pombe   305 TENNEVSQQDSSVTNTSSRILGIPQLFQNCISECDVDIRASLLNNVIVCGGTSLMQGFSLRLQNE 369

  Fly   364 LQLRAPSNTRLKMISANGSVERRFGAWIGGSILASIGTFQQMWISSQEYEEAGKSQ---VERKC 424
            |....| .:|||:.::...|||.:.:|:|||||:|:|||.|:|||.|||||.|..:   :|::|
pombe   370 LSKLYP-GSRLKIHASGHVVERSYASWLGGSILSSLGTFHQLWISRQEYEEHGSDRLALIEKRC 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 135/449 (30%)
alp5NP_595820.1 COG5277 6..425 CDD:227602 138/445 (31%)
Actin 11..433 CDD:278451 135/449 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 236 1.000 Domainoid score I477
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 235 1.000 Inparanoid score I836
OMA 1 1.010 - - QHG55702
OrthoFinder 1 1.000 - - FOG0001878
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102754
Panther 1 1.100 - - O PTHR11937
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1579
TreeFam 1 0.960 - -
1110.830

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