DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actg2

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_037025.1 Gene:Actg2 / 25365 RGDID:2027 Length:376 Species:Rattus norvegicus


Alignment Length:419 Identity:140/419 - (33%)
Similarity:218/419 - (52%) Gaps:52/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV 75
            :|..|||.|.|....:.|:|.:|:|:|..||:||             :..:........|:..||
  Rat     4 EETTALVCDNGSGLCKAGFAGDDAPRAVFPSIVG-------------RPRHQGVMVGMGQKDSYV 55

  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREK 140
            . :.....|..:.::..::.|:|.|||..||:..:::.|.::..||.||.|.:||..|.:.||||
  Rat    56 G-DEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPLNPKANREK 119

  Fly   141 LTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGD 205
            :|::|||.:||||.::...|||:.::|||.|.:|:|||...|..||::|||.|..|:::..|.|.
  Rat   120 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGR 184

  Fly   206 FLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMN 270
            .|:....:.|.:.|...   ...|.:::|          |.:.|.|.         .:..||   
  Rat   185 DLTDYLMKILTERGYSF---VTTAEREIV----------RDIKEKLC---------YVALDF--- 224

  Fly   271 VLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLG---AG--QLASTSVG 330
                 ||......::......||.|:|.....|:|||:..|:||..:.:|   ||  :....|:.
  Rat   225 -----ENEMATAASSSSLEKSYELPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIM 284

  Fly   331 MCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSI 395
            .||.|:|..|:.:.|::||.|:..|..:|:.:::...|||..::|:|:   ..||::..||||||
  Rat   285 KCDIDIRKDLYANNVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSI 346

  Fly   396 LASIGTFQQMWISSQEYEEAGKSQVERKC 424
            |||:.||||||||..||:|||.|.|.|||
  Rat   347 LASLSTFQQMWISKPEYDEAGPSIVHRKC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 139/417 (33%)
Actg2NP_037025.1 PTZ00281 1..376 CDD:173506 140/419 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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