DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and Actr3b

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_001004365.1 Gene:Actr3b / 242894 MGIID:2661120 Length:418 Species:Mus musculus


Alignment Length:439 Identity:113/439 - (25%)
Similarity:189/439 - (43%) Gaps:78/439 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 VFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYVDTNYVT 81
            |.|.|....::|||....|:..|||.:.|..:.:. :|...:    ......|...|::....:.
Mouse     9 VVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKV-VDQAQR----RVLRGVDDLDFFIGDEAID 68

  Fly    82 VPRSNMEVQTY-----MKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREKL 141
            .|       ||     ::.|::::|||.|:.::......:::|||.|..|.:|...|...|||.|
Mouse    69 KP-------TYATKWPIRHGIVEDWDLMERFMEQVVFKYLRAEPEDHYFLMTEPPLNTPENREYL 126

  Fly   142 TELMFEKYNVPAFFLVKNAVLAAFSSGRA--------TALVVDSGATHTSAVPVHEGYVLSQAVV 198
            .|:|||.:|||..::...||||..:|..:        |.:|:|||...|..:||.||||:...:.
Mouse   127 AEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIK 191

  Fly   199 KSPLGGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLM 263
            ..|:.|..::...:|.|.:..:.:.|...:.:...:||:                  ..|:...:
Mouse   192 HIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEK------------------YCYICPDI 238

  Fly   264 MQDFQMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQ-----DFGSERFKIAESLFDNAMLGAGQ 323
            :::|       .:...|.|...:    .|...|..:|     |.|.|||...|..|.........
Mouse   239 VREF-------AKYDVDPRKWIK----QYTGINAINQKKFIIDVGYERFLGPEIFFHPEFANPDF 292

  Fly   324 LASTS------VGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGS 382
            :.|.|      :..|..|||..|:.:||::||:|:.:.|..||.|||:....:..:|....:.|.
Mouse   293 MESISDVVDEVIQSCPIDVRRPLYKNVVLSGGSTMFRDFGRRLQRDLKRVVDARLKLSQELSGGR 357

  Fly   383 VE-------------RRFGAWIGGSILASIGTFQQMWISSQEYEEAGKS 418
            ::             :|:..|.|||:|||...|.|:..:.::|||.|.|
Mouse   358 IKPKPVEVQVVTHHMQRYAVWFGGSMLASTPEFFQVCHTKKDYEEYGPS 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 113/439 (26%)
Actr3bNP_001004365.1 COG5277 1..410 CDD:227602 113/439 (26%)
PTZ00280 2..417 CDD:240343 113/439 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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