DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Bap55 and Actr1b

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_666219.1 Gene:Actr1b / 226977 MGIID:1917446 Length:376 Species:Mus musculus


Alignment Length:421 Identity:127/421 - (30%)
Similarity:207/421 - (49%) Gaps:71/421 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 LVFDPGHHSLRVGYAQEDSPKAEIPSVVG-------IGAAPETNLDPETKTDNNATPNNADQRKF 73
            :|.|.|...::.|:|.:..||...|:.||       :..|.|.:|....|.:.:           
Mouse    12 VVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKHMRVMAGALEGDLFIGPKAEEH----------- 65

  Fly    74 YVDTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYA-NVIQSEPEYHPVLFSEASWNVRNN 137
                      |..:.::..|:.|::.:|:..|::..|.|: :.:|:..|.||||.:||..|...|
Mouse    66 ----------RGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTFSEEHPVLLTEAPLNPSKN 120

  Fly   138 REKLTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPL 202
            |||..|:.||.:||||.|:...|||:.:::||.|.:|:|||...|.|||::||:.:..::::..:
Mouse   121 REKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDSGDGVTHAVPIYEGFAMPHSIMRVDI 185

  Fly   203 GGDFLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDF 267
            .|..:||..|..|.|.|.|.....:......:|||                              
Mouse   186 AGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIKER------------------------------ 220

  Fly   268 QMNVLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAML-----GAGQLAST 327
               ...:..||..:. |.:...|.|..|:|...|.|..||:..|.||...::     |..::.:.
Mouse   221 ---ACYLSINPQKDE-ALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLHEVLAF 281

  Fly   328 SVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIG 392
            ::...|.|:|.:||.::|::||:||.:||.:||..:::..||.:.::| |||  ..||.:..|||
Mouse   282 AIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIK-ISA--PQERLYSTWIG 343

  Fly   393 GSILASIGTFQQMWISSQEYEEAGKSQVERK 423
            ||||||:.||::||:|.:||||.|...:.||
Mouse   344 GSILASLDTFKKMWVSKKEYEEDGSRAIHRK 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 127/421 (30%)
Actr1bNP_666219.1 NBD_sugar-kinase_HSP70_actin 5..376 CDD:418402 127/421 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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