DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and arp-11

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_501314.2 Gene:arp-11 / 183628 WormBaseID:WBGene00016793 Length:384 Species:Caenorhabditis elegans


Alignment Length:434 Identity:97/434 - (22%)
Similarity:182/434 - (41%) Gaps:107/434 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RVGYAQEDSPKAEIPSVVGIGAAPETNLDPETK---TDNNATPNNADQRKFYVDTNYVTVPRSNM 87
            |:|.|.|.:|:..|.:         ..:|.|.|   :|.....||   ||        |..:|. 
 Worm     3 RIGCAGEITPRHIIRT---------EYVDDEGKLITSDELLALNN---RK--------TATKST- 46

  Fly    88 EVQTYMKDGMIDNWDLFEKVIDYAYANVIQSE---PEYHPVLFSEASWNVRNNREKLTELMFEKY 149
                          :.:|::: |.:..::..:   |...||:|.|:.:...:.|..:|:::.||.
 Worm    47 --------------EYYEEIL-YKFLRIVFLKVLAPTDRPVIFVESIFMSESLRNTITKIVVEKI 96

  Fly   150 NVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGY-VLSQAVVKSPLGGDFLSRQCRQ 213
            ...:...:.:.|.|.|......|||||.|.:...|||:.||. :|::......:.|..|.|:.|:
 Worm    97 RCKSLMFMPSHVCATFPFNTQNALVVDIGHSECIAVPIIEGVTMLNEFESARSICGRQLERRVRE 161

  Fly   214 HLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMNVL----QV 274
            .:||:|       :||..       ||.  .|.:.||   .||:.....:::...::::    :.
 Worm   162 QMEKYG-------QIAEL-------NGE--RRAITEN---DWQDIDACKLIETLSLSLICLDKER 207

  Fly   275 LEN-----PFDERVAAQIPTVHYE--FPNGYHQDFGSERFKIAESLFDNAM-------------- 318
            .||     ..:|.....|.|:..|  |||      ..:.|.:...:|:.:.              
 Worm   208 AENWTKWEASEEGEKPDIETLCKERLFPN------NGKIFVVPPVVFETSTEIFFNENLNPTSFD 266

  Fly   319 LGAGQLASTSVGMCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQ-LRAPSNTRLKMI----- 377
            |...:|....|..|..|:|..||.::::|||.:.:.|..:||.:::| :...:|:::.:|     
 Worm   267 LSLPKLLHKLVSKCPIDLRKKLFPNILLTGGVSTIPGLMKRLEQEIQVIDEKNNSKIAVIVKFYQ 331

  Fly   378 ---SANGSVERRFGAWIGGSILASI-GTFQQMWISSQEYEEAGK 417
               ..|..:   |.:|:|.|:|.|: .|.::..::.:|::. ||
 Worm   332 FSEIKNTPL---FVSWLGASLLGSLRETIERKSLTLEEWKN-GK 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 97/434 (22%)
arp-11NP_501314.2 NBD_sugar-kinase_HSP70_actin 3..368 CDD:302596 95/428 (22%)
ACTIN 3..367 CDD:214592 94/427 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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