DRSC/TRiP Functional Genomics Resources

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Protein Alignment Bap55 and act-4

DIOPT Version :9

Sequence 1:NP_611209.1 Gene:Bap55 / 36956 FlyBaseID:FBgn0025716 Length:425 Species:Drosophila melanogaster
Sequence 2:NP_508841.1 Gene:act-4 / 180767 WormBaseID:WBGene00000066 Length:376 Species:Caenorhabditis elegans


Alignment Length:419 Identity:140/419 - (33%)
Similarity:222/419 - (52%) Gaps:52/419 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 DEIGALVFDPGHHSLRVGYAQEDSPKAEIPSVVGIGAAPETNLDPETKTDNNATPNNADQRKFYV 75
            ||:.|||.|.|....:.|:|.:|:|:|..||:||             :..:........|:..||
 Worm     4 DEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG-------------RPRHQGVMVGMGQKDSYV 55

  Fly    76 DTNYVTVPRSNMEVQTYMKDGMIDNWDLFEKVIDYAYANVIQSEPEYHPVLFSEASWNVRNNREK 140
            . :.....|..:.::..::.|::.|||..||:..:.:.|.::..||.||||.:||..|.:.||||
 Worm    56 G-DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 119

  Fly   141 LTELMFEKYNVPAFFLVKNAVLAAFSSGRATALVVDSGATHTSAVPVHEGYVLSQAVVKSPLGGD 205
            :|::|||.:|.||.::...|||:.::|||.|.:|:|||...|..||::|||.|..|:::..|.|.
 Worm   120 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGR 184

  Fly   206 FLSRQCRQHLEKHGIDLSPVYKIASKDVVKERDNGRFTLRKLPENLTQSWQNYMLQLMMQDFQMN 270
            .|:....:.|.:.|...:..   |.:::|          |.:.|.|.         .:..||:..
 Worm   185 DLTDYLMKILTERGYSFTTT---AEREIV----------RDIKEKLC---------YVALDFEQE 227

  Fly   271 VLQVLENPFDERVAAQIPTVHYEFPNGYHQDFGSERFKIAESLFDNAMLG---AG--QLASTSVG 330
            :.....:...|:        .||.|:|.....|:|||:..|:||..:.||   ||  :.:..|:.
 Worm   228 MATAASSSSLEK--------SYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIM 284

  Fly   331 MCDADVRLSLFGSVVVTGGNTLLQGFPERLNRDLQLRAPSNTRLKMISANGSVERRFGAWIGGSI 395
            .||.|:|..|:.:.|::||.|:..|..:|:.:::...|||..::|:|:   ..||::..||||||
 Worm   285 KCDIDIRKDLYANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIA---PPERKYSVWIGGSI 346

  Fly   396 LASIGTFQQMWISSQEYEEAGKSQVERKC 424
            |||:.||||||||.|||:|:|.|.|.|||
 Worm   347 LASLSTFQQMWISKQEYDESGPSIVHRKC 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Bap55NP_611209.1 Actin 13..425 CDD:394979 138/417 (33%)
act-4NP_508841.1 PTZ00281 1..376 CDD:173506 140/419 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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